RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 MUTP22033 750 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 NAMPTP43490 491 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 PTPN5P54829 565 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 PCBP1Q15365 356 aaKnown RBP eCLIP18.5■□□□□ 0.554e-10■■■■■ 32.7
PDLIM7-215ENST00000506161 FAM187BQ17R55 369 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 NT5DC1Q5TFE4 455 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 SLC27A1Q6PCB7 646 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 RNF168Q8IYW5 571 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 C12orf76Q8N812 135 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 SLC22A17Q8WUG5 538 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 CCDC51Q96ER9 411 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 BACH2Q9BYV9 841 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 DOCK6Q96HP0 2047 aa18.5■□□□□ 0.55
PDLIM7-215ENST00000506161 ZNF318Q5VUA4 2279 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 PTGESO14684 152 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 LILRB3O75022 631 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 PRKCBP05771 671 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 CA8P35219 290 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 RILPL1Q5EBL4 403 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 C1orf186Q6ZWK4 172 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 CNNM3Q8NE01 707 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 PRSS33Q8NF86 280 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 B3GALT6Q96L58 329 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 POP1Q99575 1024 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 TMEM175Q9BSA9 504 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 PRMT7Q9NVM4 692 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 SNTG2Q9NY99 539 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 MUTYHQ9UIF7 546 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 TECTAO75443 2155 aa18.49■□□□□ 0.55
PDLIM7-215ENST00000506161 VWA3AA6NCI4 1184 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 SFI1A8K8P3 1242 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 LOC730098B7Z3J9 87 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 H3BQV1 296 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 HIP1RO75146 1068 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 OR1G1P47890 313 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 NAB2Q15742 525 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 HERC4Q5GLZ8 1057 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 HYIQ5T013 277 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 PARP2Q9UGN5 583 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 FAN1Q9Y2M0 1017 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 GIT1Q9Y2X7 761 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 IRAK3Q9Y616 596 aa18.48■□□□□ 0.55
PDLIM7-215ENST00000506161 NPHP3-ACAD11A0A0J9YXS1 232 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 LAD1O00515 517 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 ACKR2O00590 384 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 SP100P23497 879 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 MCM2P49736 904 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 ZRSR1Q15695 479 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 RNF135Q8IUD6 432 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 ZBTB8OSQ8IWT0 167 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 CEP120Q8N960 986 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 DEPTORQ8TB45 409 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 RSPH1Q8WYR4 309 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 KLHL5Q96PQ7 755 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 PRRX2Q99811 253 aa18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-215ENST00000506161 C2CD2LO14523 706 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 RECQL4O94761 1208 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 ALDH2P05091 517 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 CNPP09543 421 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 NPTX2P47972 431 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 PEX3P56589 373 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 TMEM119Q4V9L6 283 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 KRT79Q5XKE5 535 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 TMEM130Q8N3G9 435 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 RPGRIP1Q96KN7 1286 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 FAM193BQ96PV7 902 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 HERC2P3Q9BVR0 1158 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 GPR62Q9BZJ7 368 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 POMKQ9H5K3 350 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 KANSL3Q9P2N6 904 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 KIF3AQ9Y496 699 aa18.46■□□□□ 0.55
PDLIM7-215ENST00000506161 ABLIM1O14639 778 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 MYBP10242 640 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 FOXK2Q01167 660 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 CBX2Q14781 532 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 MAPK6Q16659 721 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 IER5LQ5T953 404 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 EDAQ92838 391 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 PHF7Q9BWX1 381 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 C2orf40Q9H1Z8 148 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 UBN1Q9NPG3 1134 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 DNM3Q9UQ16 869 aa18.45■□□□□ 0.54
PDLIM7-215ENST00000506161 ANK1P16157 1881 aa18.44■□□□□ 0.54
PDLIM7-215ENST00000506161 CASTOR2A6NHX0 329 aa18.44■□□□□ 0.54
PDLIM7-215ENST00000506161 N4BP3O15049 544 aa18.44■□□□□ 0.54
PDLIM7-215ENST00000506161 SOD2P04179 222 aa18.44■□□□□ 0.54
PDLIM7-215ENST00000506161 CLCN4P51793 760 aa18.44■□□□□ 0.54
PDLIM7-215ENST00000506161 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms