RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 TPD52L1Q16890 204 aaPredicted RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 ATF7IP2Q5U623 682 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 ARMCX5Q6P1M9 558 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 MPZL3Q6UWV2 235 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 LRRC8DQ7L1W4 858 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CATSPER4Q7RTX7 472 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 POMGNT1Q8WZA1 660 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CCDC51Q96ER9 411 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 BICD1Q96G01 975 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 BORCS6Q96GS4 357 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 ABHD8Q96I13 439 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 ZBTB45Q96K62 511 aaPredicted RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 SCLT1Q96NL6 688 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 PPP1R16BQ96T49 567 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CBWD1Q9BRT8 395 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 PDCL3Q9H2J4 239 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 PDZD7Q9H5P4 517 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 KIAA1586Q9HCI6 787 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 ERVK-5Q9HDB9 667 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 CHST12Q9NRB3 414 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 SAMSN1Q9NSI8 373 aaKnown RBP7.87□□□□□ -1.15
NUP54-204ENST00000506098 AGPAT5Q9NUQ2 364 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 FANCLQ9NW38 375 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 VWA8A3KMH1 1905 aa7.87□□□□□ -1.15
NUP54-204ENST00000506098 MTCL1Q9Y4B5 1905 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 TISP43B9A030 160 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 GOLGA6L19H0YKK7 550 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 KIAA0355O15063 1070 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 OGTO15294 1046 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 SLC16A3O15427 465 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 CLDN3O15551 220 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 CXCL10P02778 98 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 ADRB2P07550 413 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 CTSHP09668 335 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 MCF2P10911 925 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 FGFR4P22455 802 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 EEF1GP26641 437 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 PSMC2P35998 433 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 TPM4P67936 248 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 DSC3Q14574 896 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 NOLC1Q14978 699 aaKnown RBP eCLIP7.86□□□□□ -1.15
NUP54-204ENST00000506098 KYAT1Q16773 422 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 EEF1DP3Q658K8 133 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 NOTUMQ6P988 496 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 SLC27A1Q6PCB7 646 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 CRELD2Q6UXH1 353 aaPredicted RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 FRMD5Q7Z6J6 570 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 FAM114A1Q8IWE2 563 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 GPD1LQ8N335 351 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 XXYLT1Q8NBI6 393 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 CPB2Q96IY4 423 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 OSBPL7Q9BZF2 842 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 HIPK3Q9H422 1215 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 AGO3Q9H9G7 860 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 HSPBP1Q9NZL4 362 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 LIMA1Q9UHB6 759 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 AGO2Q9UKV8 859 aaKnown RBP7.86□□□□□ -1.15
NUP54-204ENST00000506098 PADI3Q9ULW8 664 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 ST3GAL5Q9UNP4 418 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 GINS2Q9Y248 185 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 ATP11BQ9Y2G3 1177 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 USP20Q9Y2K6 914 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 PTPRDP23468 1912 aa7.86□□□□□ -1.15
NUP54-204ENST00000506098 TSC2P49815 1807 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 UMODL1Q5DID0 1318 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 GOLGA6L3A6NEY3 463 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 EXTL3O43909 919 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 NBNO60934 754 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 AKAP3O75969 853 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 TIMP1P01033 207 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 GHRP10912 638 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 CD52P31358 61 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 RFC2P35250 354 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 CASP4P49662 377 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 CYP2J2P51589 502 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 SPAG1Q07617 926 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 PAK2Q13177 524 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 DCAF4L1Q3SXM0 396 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 ZNF568Q3ZCX4 644 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 PLEKHG4Q58EX7 1191 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 TCP11X2Q5H9J9 407 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 UBXN11Q5T124 520 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 SARM1Q6SZW1 724 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 APTXQ7Z2E3 356 aaKnown RBP7.85□□□□□ -1.15
NUP54-204ENST00000506098 APBB1IPQ7Z5R6 666 aaPredicted RBP7.85□□□□□ -1.15
NUP54-204ENST00000506098 TRIM59Q8IWR1 403 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 ZSWIM2Q8NEG5 633 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 CNOT6LQ96LI5 555 aaKnown RBP7.85□□□□□ -1.15
NUP54-204ENST00000506098 MFSD14AQ96MC6 490 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 ADPGKQ9BRR6 497 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 MSTO1Q9BUK6 570 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 WNT8AQ9H1J5 351 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 CDT1Q9H211 546 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 TMX1Q9H3N1 280 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 PCIF1Q9H4Z3 704 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 METTL14Q9HCE5 456 aaKnown RBP7.85□□□□□ -1.15
NUP54-204ENST00000506098 TMEM39AQ9NV64 488 aa7.85□□□□□ -1.15
NUP54-204ENST00000506098 CPSF3Q9UKF6 684 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms