RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MILR1Q7Z6M3 343 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 SKAP1Q86WV1 359 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 NKAPQ8N5F7 415 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 TEX19Q8NA77 164 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 ATXN2LQ8WWM7 1075 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCT6BQ92526 530 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 CDK5RAP3Q96JB5 506 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 SAMD11Q96NU1 681 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 LRFN3Q9BTN0 628 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 ADI1Q9BV57 179 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 APOL5Q9BWW9 433 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 BTBD1Q9H0C5 482 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 FNIP2Q9P278 1114 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 FBLN5Q9UBX5 448 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 LIMCH1Q9UPQ0 1083 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 IPPQ9Y573 584 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 CDY2AQ9Y6F7 541 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CFAP69A5D8W1 941 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 RHPN2P1A8MT19 583 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 SGSM2O43147 1006 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 NRP2O60462 931 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 GLI4P10075 376 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 XPAP23025 273 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CNR2P34972 360 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 ACVRL1P37023 503 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 GRIN1Q05586 938 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PPARAQ07869 468 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 DBPQ10586 325 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 TRIM25Q14258 630 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 MAPRE1Q15691 268 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PLEKHN1Q494U1 663 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 GJC2Q5T442 439 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PAQR3Q6TCH7 311 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 MIGA2Q7L4E1 593 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 TTC7BQ86TV6 843 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 LYSMD2Q8IV50 215 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZFPM1Q8IX07 1006 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 OR2C3Q8N628 320 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 KLHDC4Q8TBB5 520 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 NRG4Q8WWG1 115 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PHKBQ93100 1093 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PEX11GQ96HA9 241 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 RIPOR3Q96MK2 946 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 LRRC27Q9C0I9 530 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 WDR12Q9GZL7 423 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 ARHGAP28Q9P2N2 729 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 DENND2AQ9ULE3 1009 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 TPCN1Q9ULQ1 816 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PADI4Q9UM07 663 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 FRS3O43559 492 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 FZD7O75084 574 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PCDH8O95206 1070 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZBTB7AO95365 584 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CYBBP04839 570 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 MSL3P1P0C860 447 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 MYF5P13349 255 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 EDNRBP24530 442 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRIM2P49643 509 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCT2P78371 535 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZNF200P98182 395 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 TNFAIP2Q03169 654 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 TRIM14Q14142 442 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 ADRM1Q16186 407 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 BTNL9Q6UXG8 535 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 UNQ6494/PRO21346Q6UXR6 183 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 LIPIQ6XZB0 460 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CDYL2Q8N8U2 506 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 GAB3Q8WWW8 586 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 RGMAQ96B86 450 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 MTFMTQ96DP5 389 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 LOXL4Q96JB6 756 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 CRB3Q9BUF7 120 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 VPS11Q9H270 941 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRDM12Q9H4Q4 367 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 GREM2Q9H772 168 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 BTBD7Q9P203 1132 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 DBR1Q9UK59 544 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 USP18Q9UMW8 372 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 DGKBQ9Y6T7 804 aa4.72□□□□□ -1.65
TRAPPC13-208ENST00000505553 IRS2Q9Y4H2 1338 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 A0A088AWK7 358 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 FAM171A2A8MVW0 826 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 F8W031 263 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 DBHP09172 617 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 GSPT1P15170 499 aaKnown RBP4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 PTGS1P23219 599 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 PIK3CBP42338 1070 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 MCAMP43121 646 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 GRK6P43250 576 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 RGS3P49796 1198 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 RENBPP51606 427 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 NRG3P56975 720 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 LMOD3Q0VAK6 560 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 ELF2Q15723 593 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 C3orf36Q3SXR2 165 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms