RNA–Protein interactions for RNA: ENST00000504968.6

SEC24B-203, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC24B, Length 4,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-203ENST00000504968 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
SEC24B-203ENST00000504968 PGRMC1O00264 195 aaKnown RBP12.89□□□□□ -0.35
SEC24B-203ENST00000504968 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
SEC24B-203ENST00000504968 GHRP10912 638 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 FERP16591 822 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 CCNFP41002 786 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 PTK2Q05397 1052 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 SEC23AQ15436 765 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 TCERG1LQ5VWI1 586 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 SPATA21Q7Z572 469 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 CABP7Q86V35 215 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 FGFBP2Q9BYJ0 223 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
SEC24B-203ENST00000504968 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
SEC24B-203ENST00000504968 AHCYL1O43865 530 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 SPATA31D3P0C874 917 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 PTDSS1P48651 473 aaKnown RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ITIH3Q06033 890 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 FOXB2Q5VYV0 432 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 SPATA31D4Q6ZUB0 917 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 LMNTD2Q8IXW0 634 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 TMEM120BA0PK00 339 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 CCNT1O60563 726 aaKnown RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 PMS2P54278 862 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ROR2Q01974 943 aaKnown RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 MGAT5Q09328 741 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 TROAPQ12815 778 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 NAB2Q15742 525 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 PIGWQ7Z7B1 504 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 RNF10Q8N5U6 811 aaKnown RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 DRAXINQ8NBI3 349 aaPredicted RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 FGD4Q96M96 766 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 FGRP09769 529 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 MYCLP12524 364 aaPredicted RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 KCNMB3Q9NPA1 279 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 RFWD3Q6PCD5 774 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
SEC24B-203ENST00000504968 ERGIC2Q96RQ1 377 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
SEC24B-203ENST00000504968 SPAG7O75391 227 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 PRPHP41219 470 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 ZNF572Q7Z3I7 529 aaPredicted RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 FAM118BQ9BPY3 351 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SLC9A1P19634 815 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 FUT4P22083 530 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 MTM1Q13496 603 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 CUL3Q13618 768 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SHROOM1Q2M3G4 852 aaPredicted RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SLC5A9Q2M3M2 681 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 CYP4F22Q6NT55 531 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 U2AF1L4Q8WU68 220 aaKnown RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 ABTB1Q969K4 478 aaPredicted RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 MKL1Q969V6 931 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 PDHXO00330 501 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SUN1O94901 812 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 RBM41Q96IZ5 413 aaKnown RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 MOV10L1Q9BXT6 1211 aaKnown RBP12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 SNCAIPQ9Y6H5 919 aa12.87□□□□□ -0.35
SEC24B-203ENST00000504968 WDR91A4D1P6 747 aa12.86□□□□□ -0.35
SEC24B-203ENST00000504968 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
SEC24B-203ENST00000504968 KLC1Q07866 573 aa12.86□□□□□ -0.35
SEC24B-203ENST00000504968 CUL1Q13616 776 aa12.86□□□□□ -0.35
SEC24B-203ENST00000504968 MPP2Q14168 576 aa12.86□□□□□ -0.35
SEC24B-203ENST00000504968 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
SEC24B-203ENST00000504968 AGBL2Q5U5Z8 902 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms