RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZSWIM2Q8NEG5 633 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 SCLYQ96I15 445 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 TUBGCP5Q96RT8 1024 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 MRPL4Q9BYD3 311 aaKnown RBP3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 PITHD1Q9GZP4 211 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 SPON1Q9HCB6 807 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 LRP12Q9Y561 859 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 A0A0A6YYJ9 748 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 B4E1Z4 1266 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 KRT37O76014 449 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 CELA2AP08217 269 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZBTB48P10074 688 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 GAAP10253 952 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 RBM25P49756 843 aaKnown RBP3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 KIF11P52732 1056 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 ADCY1Q08828 1119 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 RAPGEF1Q13905 1077 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 PDCD4Q53EL6 469 aaKnown RBP3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 NAALADL2Q58DX5 795 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 OTOP1Q7RTM1 612 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 DDX53Q86TM3 631 aaKnown RBP3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 PPP1R14CQ8TAE6 165 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 DDB2Q92466 427 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 FUBP1Q96AE4 644 aaKnown RBP3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 PDLIM2Q96JY6 352 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 HIST1H2AHQ96KK5 128 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 HIST1H2AJQ99878 128 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 KLK15Q9H2R5 256 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 PCIF1Q9H4Z3 704 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 ING3Q9NXR8 418 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 FOXJ2Q9P0K8 574 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 ARPP21Q9UBL0 812 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZNF804BA4D1E1 1349 aa3.12□□□□□ -1.91
HMGB3P17-201ENST00000504195 B5MCH6 92 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 KCNQ2O43526 872 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 CFIP05156 583 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 KCNA6P17658 529 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 GTF2F1P35269 517 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 CASRP41180 1078 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 POLGP54098 1239 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 FOXG1P55316 489 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 MRPS35P82673 323 aaKnown RBP3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 SERINC3Q13530 473 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 RASA3Q14644 834 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 TIGD7Q6NT04 549 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 EFCAB12Q6NXP0 572 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 ABHD17CQ6PCB6 329 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 OR10H5Q8NGA6 315 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 ADAMTS15Q8TE58 950 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 Q96MF0 132 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 UROC1Q96N76 676 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 DNAJC7Q99615 494 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 SNTG2Q9NY99 539 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 TNPO3Q9Y5L0 923 aaKnown RBP3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZNF521Q96K83 1311 aa3.11□□□□□ -1.91
HMGB3P17-201ENST00000504195 FAM221BA6H8Z2 402 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 ORC4O43929 436 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 NTN1O95631 604 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 SNHG28P0DPA3 235 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 RANGAP1P46060 587 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 DUSP2Q05923 314 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 ADCY2Q08462 1091 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 EPHA7Q15375 998 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 AKNAD1Q5T1N1 836 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 KANSL1Q7Z3B3 1105 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 FGD2Q7Z6J4 655 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 SYT12Q8IV01 421 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 CHST14Q8NCH0 376 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 HASPINQ8TF76 798 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 ARMC5Q96C12 935 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZNF48Q96MX3 618 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 SRPK1Q96SB4 655 aaKnown RBP3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 CABP5Q9NP86 173 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 TBCCD1Q9NVR7 557 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 SAMD15Q9P1V8 674 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 POGKQ9P215 609 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 DMTF1Q9Y222 760 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 ATP11BQ9Y2G3 1177 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 NOX1Q9Y5S8 564 aa3.1□□□□□ -1.91
HMGB3P17-201ENST00000504195 E9PSI1 815 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 H7C1D1 291 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 M0R2C6 588 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 OPHN1O60890 802 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 CFBP00751 764 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 MECP2P51608 486 aaKnown RBP3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 SOX10P56693 466 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZNF174Q15697 407 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 BMT2Q1RMZ1 405 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 FAM102AQ5T9C2 384 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 SOGA3Q5TF21 947 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 C11orf87Q6NUJ2 197 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZCCHC8Q6NZY4 707 aaKnown RBP3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 TAS1R1Q7RTX1 841 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 TECPR1Q7Z6L1 1165 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 GPR149Q86SP6 731 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 PHYKPLQ8IUZ5 450 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 JMYQ8N9B5 988 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 ACTRT2Q8TDY3 377 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 TIMP4Q99727 224 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 NOL10Q9BSC4 688 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms