RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ANKRD49Q8WVL7 239 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 ARHGEF2Q92974 986 aaKnown RBP4.12□□□□□ -1.75
SUB1-202ENST00000502453 C7orf26Q96N11 449 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 USP26Q9BXU7 913 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 SEPT11Q9NVA2 429 aaKnown RBP4.12□□□□□ -1.75
SUB1-202ENST00000502453 TBC1D7Q9P0N9 293 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
SUB1-202ENST00000502453 TACC3Q9Y6A5 838 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 USP19O94966 1318 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 CCDC154A6NI56 674 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 A8MV72 311 aaPredicted RBP4.12□□□□□ -1.75
SUB1-202ENST00000502453 H0YC42 278 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 H7C1D1 291 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 APBB3O95704 486 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 EGFRP00533 1210 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 FTLP02792 175 aaPredicted RBP4.12□□□□□ -1.75
SUB1-202ENST00000502453 CYP17A1P05093 508 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 GAP43P17677 238 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 KRT15P19012 456 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 TLX1P31314 330 aaPredicted RBP4.12□□□□□ -1.75
SUB1-202ENST00000502453 PTGIRP43119 386 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 CSE1LP55060 971 aaKnown RBP4.12□□□□□ -1.75
SUB1-202ENST00000502453 WSCD2Q2TBF2 565 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 KDELC1Q6UW63 502 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 ZER1Q7Z7L7 766 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 PPIL6Q8IXY8 311 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 LRRC46Q96FV0 321 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 MRGPRX3Q96LB0 322 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 ALG1Q9BT22 464 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 AGXT2Q9BYV1 514 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 CATSPERZQ9NTU4 200 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 ZDHHC3Q9NYG2 299 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 STXBP5LQ9Y2K9 1186 aa4.12□□□□□ -1.75
SUB1-202ENST00000502453 PODXLO00592 558 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 PIP5K1BO14986 540 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 PTP4A3O75365 173 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 AMPHP49418 695 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CYP4A11Q02928 519 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 UBE3AQ05086 875 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 TBC1D8BQ0IIM8 1120 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 MAP4K2Q12851 820 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 NFE2L1Q14494 772 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 MUM1Q2TAK8 710 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 PAN2Q504Q3 1202 aaKnown RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 SPDYCQ5MJ68 293 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 C10orf76Q5T2E6 689 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 SLC9C2Q5TAH2 1124 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 STYK1Q6J9G0 422 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 ACAD10Q6JQN1 1059 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 TRIM74Q86UV6 250 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 TRIM73Q86UV7 250 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 ZIC5Q96T25 663 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 EYA3Q99504 573 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 THAP9Q9H5L6 903 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 C6orf203Q9P0P8 240 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 CPNE7Q9UBL6 633 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 LIMCH1Q9UPQ0 1083 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 TMEM5Q9Y2B1 443 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 EMC9Q9Y3B6 208 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 AP1M2Q9Y6Q5 423 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 DDX49Q9Y6V7 483 aaKnown RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 LINC00854A0A1B0GVQ3 168 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 NT5C1B-RDH14C9J2C7 533 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 NFKBIEO00221 500 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 SRGAP2O75044 1071 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 ADH1CP00326 375 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 LPLP06858 475 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 MYL4P12829 197 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CD247P20963 164 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 SLC7A1P30825 629 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 AGFG1P52594 562 aaKnown RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 LAPTM5Q13571 262 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 RRAGBQ5VZM2 374 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CCDC62Q6P9F0 684 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 PRICKLE2Q7Z3G6 844 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CRACR2BQ8N4Y2 399 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 PLBD2Q8NHP8 589 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 PCDH19Q8TAB3 1148 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CSGALNACT1Q8TDX6 532 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 XAGE3Q8WTP9 111 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 DCAF4Q8WV16 495 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 USP6NLQ92738 828 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 FAM81BQ96LP2 452 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 ELF4Q99607 663 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 SLC39A3Q9BRY0 314 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 GPR63Q9BZJ6 419 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 IL21Q9HBE4 155 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 QPCTLQ9NXS2 382 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 WHRNQ9P202 907 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 C2CD2Q9Y426 696 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 SNX8Q9Y5X2 465 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 A0A1W2PNR3 127 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 C2orf81A6NN90 581 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 AKR1B15C9JRZ8 316 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 KERAO60938 352 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 THP07101 528 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 GSTP1P09211 210 aaKnown RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 P4HA1P13674 534 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CHMP24386 653 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms