RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 SETD4Q9NVD3 440 aa9.17□□□□□ -0.94
SF3A1-210ENST00000498259 RBAKQ9NYW8 714 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-210ENST00000498259 ANKFY1Q9P2R3 1169 aa9.17□□□□□ -0.94
SF3A1-210ENST00000498259 GABRQQ9UN88 632 aa9.17□□□□□ -0.94
SF3A1-210ENST00000498259 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-210ENST00000498259 ADGRA3Q8IWK6 1321 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 CNTNAP2Q9UHC6 1331 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 SSU72P8A0A1W2PR75 194 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 ANKRD63C9JTQ0 380 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 PHACTR2O75167 634 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 SERPING1P05155 500 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 UCHL3P15374 230 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 FERP16591 822 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 PON1P27169 355 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 STAT1P42224 750 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 MFAP3P55082 362 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 NLRP11P59045 1033 aaKnown RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 POLR2FP61218 127 aaKnown RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 CLDN10P78369 228 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 MKRN4PQ13434 485 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 ZNF568Q3ZCX4 644 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 TMEM63BQ5T3F8 832 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 TRIM65Q6PJ69 517 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 SESTD1Q86VW0 696 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 NT5DC4Q86YG4 428 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 HACE1Q8IYU2 909 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 KIAA0319LQ8IZA0 1049 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 CCAR2Q8N163 923 aaKnown RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 LINC01465Q8N7H1 131 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 FBXL13Q8NEE6 735 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 CD99L2Q8TCZ2 262 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 TRAPPC12Q8WVT3 735 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 JAKMIP2Q96AA8 810 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 CCDC127Q96BQ5 260 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 SAAL1Q96ER3 474 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 STK33Q9BYT3 514 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 TSGA10Q9BZW7 698 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 TTYH3Q9C0H2 523 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 ARHGAP39Q9C0H5 1083 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 AIPL1Q9NZN9 384 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 APEX2Q9UBZ4 518 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 DDX20Q9UHI6 824 aaKnown RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 USP20Q9Y2K6 914 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 EPN1Q9Y6I3 576 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-210ENST00000498259 ARID2Q68CP9 1835 aa9.16□□□□□ -0.94
SF3A1-210ENST00000498259 MCM3APO60318 1980 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 A0A087WZ62 844 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 AKR1B10O60218 316 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CAND2O75155 1236 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 GFPT2O94808 682 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CLTAP09496 248 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 DLATP10515 647 aaKnown RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CTGFP29279 349 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 GPC3P51654 580 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CRYBB1P53674 252 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 MBTD1Q05BQ5 628 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 KCNMA1Q12791 1236 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 DRP2Q13474 957 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 ASIC2Q16515 512 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 DUOXA2Q1HG44 320 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 ARHGAP29Q52LW3 1261 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 MARCH8Q5T0T0 291 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 MAP3K21Q5TCX8 1036 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 NOTUMQ6P988 496 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 TAS1R3Q7RTX0 852 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 RPAINQ86UA6 219 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CBWD2Q8IUF1 395 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 WDR49Q8IV35 697 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 KAT2BQ92831 832 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 FAXDC2Q96IV6 333 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 GLT1D1Q96MS3 346 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 NT5C1BQ96P26 610 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 FDXACB1Q9BRP7 624 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CRACR2AQ9BSW2 395 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 TRIM6Q9C030 488 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 DNAI2Q9GZS0 605 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 ASB7Q9H672 318 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 RPF1Q9H9Y2 349 aaKnown RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 IFT122Q9HBG6 1241 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 TOPORSQ9NS56 1045 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 C1orf112Q9NSG2 853 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 RAB20Q9NX57 234 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.15□□□□□ -0.94
SF3A1-210ENST00000498259 MYO1AQ9UBC5 1043 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 PYCARDQ9ULZ3 195 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 COQ4Q9Y3A0 265 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 PAXBP1Q9Y5B6 917 aa9.15□□□□□ -0.94
SF3A1-210ENST00000498259 CASP8AP2Q9UKL3 1982 aa9.15□□□□□ -0.95
SF3A1-210ENST00000498259 DOCK5Q9H7D0 1870 aa9.15□□□□□ -0.95
SF3A1-210ENST00000498259 WDR81Q562E7 1941 aa9.14□□□□□ -0.95
SF3A1-210ENST00000498259 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
SF3A1-210ENST00000498259 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
SF3A1-210ENST00000498259 LRRC53A6NM62 1247 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms