RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 THP07101 528 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 LINC00271P0C7V0 271 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 MCF2P10911 925 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ATF7P17544 494 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 PLCG1P19174 1290 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 MARCKSP29966 332 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ZNF131P52739 623 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 BCAR1P56945 870 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 SMC1AQ14683 1233 aaKnown RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 POSTNQ15063 836 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 UBXN11Q5T124 520 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 SLFN12LQ6IEE8 588 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 TMC7Q7Z402 723 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 DDX53Q86TM3 631 aaKnown RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 MYCT1Q8N699 235 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 USP28Q96RU2 1077 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 EMILIN2Q9BXX0 1053 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 TNMDQ9H2S6 317 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ST6GALNAC4Q9H4F1 302 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 TLE6Q9H808 572 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 PLEKHA5Q9HAU0 1116 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ENTPD7Q9NQZ7 604 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 INPP5FQ9Y2H2 1132 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 IRAK3Q9Y616 596 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 UNC80Q8N2C7 3258 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 PRRC2BQ5JSZ5 2229 aaKnown RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 EYSQ5T1H1 3165 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 A0A087WWV3 80 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 ARHGEF37A1IGU5 675 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 TRAPPC3O43617 180 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 TRAK2O60296 914 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 NPTXRO95502 500 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 MYL1P05976 194 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 HOXB8P17481 243 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 GRM5P41594 1212 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 ME1P48163 572 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 NCKAP1LP55160 1127 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 CEBPZQ03701 1054 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 MAPK7Q13164 816 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 KARSQ15046 597 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 LEXMQ3ZCV2 418 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 ZNF568Q3ZCX4 644 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 CD302Q8IX05 232 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 CCDC65Q8IXS2 484 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 SLC39A11Q8N1S5 342 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 EFHBQ8N7U6 833 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 SMG8Q8ND04 991 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 TMEM161BQ8NDZ6 487 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 BICD1Q96G01 975 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 DDX27Q96GQ7 796 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 IGSF21Q96ID5 467 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 CPB2Q96IY4 423 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 EPSTI1Q96J88 318 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 ACAP3Q96P50 834 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 POP1Q99575 1024 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 ACO2Q99798 780 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 TCF25Q9BQ70 676 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 RUSC1Q9BVN2 902 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 PDZD7Q9H5P4 517 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 NRDE2Q9H7Z3 1164 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 UBE2ZQ9H832 354 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 ALG13Q9NP73 1137 aaKnown RBP8.33□□□□□ -1.08
CDHR3-214ENST00000496633 OLFML3Q9NRN5 406 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 MYH11P35749 1972 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 A0A0C4DFX4 3053 aa8.33□□□□□ -1.08
CDHR3-214ENST00000496633 PRUNE2Q8WUY3 3088 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 HNRNPDLO14979 420 aaKnown RBP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 KIAA0391O15091 583 aaKnown RBP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 SLC16A4O15374 487 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 B4GALT5O43286 388 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 LDHAP00338 332 aaKnown RBP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 PIGRP01833 764 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 URODP06132 367 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 GALTP07902 379 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 CTSAP10619 480 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 LIG1P18858 919 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 MLH1P40692 756 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 MATR3P43243 847 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 LIG4P49917 911 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 GATMP50440 423 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 SNRPFP62306 86 aaKnown RBP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 TUSC3Q13454 348 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 DHX8Q14562 1220 aaKnown RBP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 NOLC1Q14978 699 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDHR3-214ENST00000496633 TCEAL5Q5H9L2 206 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 KIAA1841Q6NSI8 718 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 LRRC55Q6ZSA7 311 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 HAUS6Q7Z4H7 955 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 CEP57L1Q8IYX8 460 aa8.32□□□□□ -1.08
CDHR3-214ENST00000496633 DAW1Q8N136 415 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms