RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 RAD54LQ92698 747 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 IGSF21Q96ID5 467 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 RPS6KC1Q96S38 1066 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 CCSER1Q9C0I3 900 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 TLE6Q9H808 572 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 CD320Q9NPF0 282 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 PARP2Q9UGN5 583 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 USP20Q9Y2K6 914 aa22.71■■□□□ 1.23
COL9A2-211ENST00000496215 RBM19Q9Y4C8 960 aaKnown RBP22.71■■□□□ 1.23
COL9A2-211ENST00000496215 MORC2Q9Y6X9 1032 aaPredicted RBP22.71■■□□□ 1.23
COL9A2-211ENST00000496215 GRXCR2A6NFK2 248 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 HIDE1A8MVS5 230 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 PER2O15055 1255 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 DDHD2O94830 711 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 PLS3P13797 630 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 NDUFV1P49821 464 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 CACNB1Q02641 598 aaPredicted RBP22.7■■□□□ 1.22
COL9A2-211ENST00000496215 DHX8Q14562 1220 aaKnown RBP22.7■■□□□ 1.22
COL9A2-211ENST00000496215 SMC1AQ14683 1233 aaKnown RBP22.7■■□□□ 1.22
COL9A2-211ENST00000496215 CLUL1Q15846 466 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 SPECC1Q5M775 1068 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 LRRC15Q8TF66 581 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 EPSTI1Q96J88 318 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 CDCA3Q99618 268 aaPredicted RBP22.7■■□□□ 1.22
COL9A2-211ENST00000496215 TMEM134Q9H6X4 195 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 BLOC1S4Q9NUP1 217 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 CLEC1BQ9P126 229 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 DAXXQ9UER7 740 aaPredicted RBP22.7■■□□□ 1.22
COL9A2-211ENST00000496215 ODF2LQ9ULJ1 636 aa22.7■■□□□ 1.22
COL9A2-211ENST00000496215 NPHP3-ACAD11A0A0J9YXS1 232 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 SFI1A8K8P3 1242 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 SLC16A4O15374 487 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 CA8P35219 290 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 NASPP49321 788 aaPredicted RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 SMTNP53814 917 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 GRIK3Q13003 919 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 BMS1Q14692 1282 aaKnown RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 SLC39A14Q15043 492 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 STK38Q15208 465 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 PUS10Q3MIT2 529 aaKnown RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 NT5DC1Q5TFE4 455 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 EEF1DP3Q658K8 133 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 KRI1Q8N9T8 703 aaKnown RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 SPRYD3Q8NCJ5 442 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 SPIRE2Q8WWL2 714 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 LARP4BQ92615 738 aaKnown RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 ZNF396Q96N95 335 aaPredicted RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 REEP2Q9BRK0 252 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 VN1R3Q9BXE9 311 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 MRPL4Q9BYD3 311 aaKnown RBP22.69■■□□□ 1.22
COL9A2-211ENST00000496215 KLK14Q9P0G3 267 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 STK39Q9UEW8 545 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 CCDC39Q9UFE4 941 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 KCNG1Q9UIX4 513 aa22.69■■□□□ 1.22
COL9A2-211ENST00000496215 KRT18P05783 430 aaKnown RBP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 ZSCAN22P10073 491 aaPredicted RBP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 MCM6Q14566 821 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 DUSP6Q16828 381 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 ARSHQ5FYA8 562 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 FOXD4L5Q5VV16 416 aaPredicted RBP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 USP49Q70CQ1 688 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 DDX53Q86TM3 631 aaKnown RBP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 FOXD4L4Q8WXT5 416 aaPredicted RBP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 KHSRPQ92945 711 aaKnown RBP eCLIP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 MSLNLQ96KJ4 702 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 CLIC6Q96NY7 704 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 ZBP1Q9H171 429 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 MIOSQ9NXC5 875 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 LARSQ9P2J5 1176 aaKnown RBP22.68■■□□□ 1.22
COL9A2-211ENST00000496215 TNFSF13BQ9Y275 285 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 FAN1Q9Y2M0 1017 aa22.68■■□□□ 1.22
COL9A2-211ENST00000496215 NRP1O14786 923 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 NR1I2O75469 434 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 RECQL4O94761 1208 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 SRGAP2BP0DMP2 458 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 OR1G1P47890 313 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 DSC1Q08554 894 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 STRN3Q13033 797 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 ZNF568Q3ZCX4 644 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 TAS1R3Q7RTX0 852 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 FAM178BQ8IXR5 827 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 COLGALT2Q8IYK4 626 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 VPS52Q8N1B4 723 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 SNTG2Q9NY99 539 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 STK17AQ9UEE5 414 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 BARX2Q9UMQ3 279 aaPredicted RBP22.67■■□□□ 1.22
COL9A2-211ENST00000496215 FAM50BQ9Y247 325 aa22.67■■□□□ 1.22
COL9A2-211ENST00000496215 PRG3Q9Y2Y8 225 aaPredicted RBP22.67■■□□□ 1.22
COL9A2-211ENST00000496215 H0YCG3 227 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 TBCAO75347 108 aaKnown RBP22.66■■□□□ 1.22
COL9A2-211ENST00000496215 FAM13AO94988 1023 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 F13A1P00488 732 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 ALDH2P05091 517 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 KCNC3Q14003 757 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 TMEM161BQ8NDZ6 487 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 GSTCDQ8NEC7 633 aa22.66■■□□□ 1.22
COL9A2-211ENST00000496215 ACO2Q99798 780 aaKnown RBP22.66■■□□□ 1.22
COL9A2-211ENST00000496215 NTPCRQ9BSD7 190 aaKnown RBP22.66■■□□□ 1.22
COL9A2-211ENST00000496215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.65■■□□□ 1.22
COL9A2-211ENST00000496215 MAPTP10636 758 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms