RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ABLIM1	O14639	778 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	IDE	P14735	1019 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	ATF7	P17544	494 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-233	ENST00000496030	AXL	P30530	894 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	CASP5	P51878	434 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	SMTN	P53814	917 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	ERVK-21	P61565	698 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	ASIC1	P78348	528 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	ZP2	Q05996	745 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	DPYD	Q12882	1025 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	COASY	Q13057	564 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	MAPK6	Q16659	721 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-233	ENST00000496030	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-233	ENST00000496030	EEF1DP3	Q658K8	133 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	UNC13D	Q70J99	1090 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	MRPL10	Q7Z7H8	261 aa	Known RBP	13.08	□□□□□ -0.32
APTX-233	ENST00000496030	CNNM3	Q8NE01	707 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	PTPRH	Q9HD43	1115 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	C1orf112	Q9NSG2	853 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	RNF19A	Q9NV58	838 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	TBC1D7	Q9P0N9	293 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	PIN4	Q9Y237	131 aa	Known RBP	13.08	□□□□□ -0.32
APTX-233	ENST00000496030	PHLPP2	Q6ZVD8	1323 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	LINC01553	A4QN01	128 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ZNF623	O75123	536 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ERLIN2	O94905	339 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	GJB5	O95377	273 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	AMH	P03971	560 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	MYL1	P05976	194 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ZSCAN20	P17040	1043 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	PROZ	P22891	400 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	HOXD13	P35453	343 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	KCNJ6	P48051	423 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	SARS	P49591	514 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	HTRA4	P83105	476 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	KCNA1	Q09470	495 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	PRPF4B	Q13523	1007 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	IER5L	Q5T953	404 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	CDR2L	Q86X02	465 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ECHDC2	Q86YB7	292 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	CCDC65	Q8IXS2	484 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	SMG8	Q8ND04	991 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	GBP4	Q96PP9	640 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	TGS1	Q96RS0	853 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ACO2	Q99798	780 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ZBED2	Q9BTP6	218 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	TARS2	Q9BW92	718 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	EIF2A	Q9BY44	585 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	IKZF4	Q9H2S9	585 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	PDZD7	Q9H5P4	517 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	RC3H2	Q9HBD1	1191 aa	Known RBP	13.07	□□□□□ -0.32
APTX-233	ENST00000496030	TBX20	Q9UMR3	447 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	ATG2A	Q2TAZ0	1938 aa		13.07	□□□□□ -0.32
APTX-233	ENST00000496030	CACNA1H	O95180	2353 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	C19orf67	A6NJJ6	358 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030		K7ENM7	598 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	PIGR	P01833	764 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	MYB	P10242	640 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	SCP2	P22307	547 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	IRS1	P35568	1242 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	TWF2	Q6IBS0	349 aa	Known RBP	13.06	□□□□□ -0.32
APTX-233	ENST00000496030	KANK3	Q6NY19	840 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	SLC39A4	Q6P5W5	647 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	NOTUM	Q6P988	496 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	NPAS4	Q8IUM7	802 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	MYOCD	Q8IZQ8	938 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	SPATA20	Q8TB22	786 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	CCDC51	Q96ER9	411 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	HAPLN2	Q9GZV7	340 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	ELAC1	Q9H777	363 aa	Known RBP	13.06	□□□□□ -0.32
APTX-233	ENST00000496030	MRPL44	Q9H9J2	332 aa	Known RBP	13.06	□□□□□ -0.32
APTX-233	ENST00000496030	FAM105A	Q9NUU6	356 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	TMEM161A	Q9NX61	479 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	DACT1	Q9NYF0	836 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	TNFSF13B	Q9Y275	285 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	PCDHB2	Q9Y5E7	798 aa		13.06	□□□□□ -0.32
APTX-233	ENST00000496030	MEIS3P2	A8K0S8	358 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030		H0YCG3	227 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	DGKI	O75912	1065 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	UPP2	O95045	317 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	EOMES	O95936	686 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	GATM	P50440	423 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	STK4	Q13043	487 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	PNOC	Q13519	176 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	POSTN	Q15063	836 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	KMT5B	Q4FZB7	885 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	ATF7IP2	Q5U623	682 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	FAM117B	Q6P1L5	589 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	SLC27A1	Q6PCB7	646 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	ZPBP2	Q6X784	338 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	MAP4K3	Q8IVH8	894 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	ERCC4	Q92889	916 aa	Predicted RBP	13.05	□□□□□ -0.32
APTX-233	ENST00000496030	ZNF689	Q96CS4	500 aa	Predicted RBP	13.05	□□□□□ -0.32
APTX-233	ENST00000496030	ZBTB45	Q96K62	511 aa	Predicted RBP	13.05	□□□□□ -0.32
APTX-233	ENST00000496030	C17orf80	Q9BSJ5	609 aa		13.05	□□□□□ -0.32
APTX-233	ENST00000496030	MRPL4	Q9BYD3	311 aa	Known RBP	13.05	□□□□□ -0.32
APTX-233	ENST00000496030	RNF39	Q9H2S5	420 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms