RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 EIF2AK1Q9BQI3 630 aaKnown RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 WNT8AQ9H1J5 351 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 KIF9Q9HAQ2 790 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 SEPT11Q9NVA2 429 aaKnown RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 ADGRA3Q8IWK6 1321 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 GAP43P17677 238 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 TAC1P20366 129 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 GPC5P78333 572 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
SDF4-207ENST00000494748 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 SEPT14Q6ZU15 432 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 CCDC105Q8IYK2 499 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 ANKRD42Q8N9B4 389 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
SDF4-207ENST00000494748 LGALS13Q9UHV8 139 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 RABGAP1Q9Y3P9 1069 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 ZBTB39O15060 712 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 TBCAO75347 108 aaKnown RBP16.47■□□□□ 0.23
SDF4-207ENST00000494748 DLG4P78352 724 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 ICA1Q05084 483 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 MESDQ14696 234 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 DYDC1Q8WWB3 177 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 NOCTQ9UK39 431 aaKnown RBP16.47■□□□□ 0.23
SDF4-207ENST00000494748 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
SDF4-207ENST00000494748 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 ARMC2Q8NEN0 867 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 MAGEB18Q96M61 343 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 ZMYND8Q9ULU4 1186 aaPredicted RBP16.46■□□□□ 0.23
SDF4-207ENST00000494748 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
SDF4-207ENST00000494748 PEX11AO75192 247 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 TTC4O95801 387 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 SREBF1P36956 1147 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 PICALMQ13492 652 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 MFSD14BQ5SR56 506 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 SLC30A10Q6XR72 485 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 ZNF720Q7Z2F6 126 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 RPUSD2Q8IZ73 545 aaKnown RBP16.46■□□□□ 0.23
SDF4-207ENST00000494748 PIGOQ8TEQ8 1089 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 IFT74Q96LB3 600 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 HERPUD2Q9BSE4 406 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 STRA6Q9BX79 667 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 LRRC42Q9Y546 428 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 GCKP35557 465 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 TNIP1Q15025 636 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
SDF4-207ENST00000494748 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
SDF4-207ENST00000494748 BRAFP15056 766 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 ADRA2BP18089 450 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 CIITAP33076 1130 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 CYP2J2P51589 502 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 KRT17Q04695 432 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 SHROOM1Q2M3G4 852 aaPredicted RBP16.45■□□□□ 0.22
SDF4-207ENST00000494748 C1orf220Q5T0J3 134 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 FAM20AQ96MK3 541 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 PWWP2AQ96N64 755 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 PLCD4Q9BRC7 762 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 ECEL1O95672 775 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 DLATP10515 647 aaKnown RBP16.45■□□□□ 0.22
SDF4-207ENST00000494748 TAL1P17542 331 aaPredicted RBP16.45■□□□□ 0.22
SDF4-207ENST00000494748 BFSP1Q12934 665 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 MKRN3Q13064 507 aaKnown RBP16.45■□□□□ 0.22
SDF4-207ENST00000494748 KCNV2Q8TDN2 545 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 MYLK2Q9H1R3 596 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 LRMDAQ9H2I8 198 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 FSCN2O14926 492 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 WDR4P57081 412 aaKnown RBP16.45■□□□□ 0.22
SDF4-207ENST00000494748 PARP6Q2NL67 630 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 MAEAQ7L5Y9 396 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 KAT5Q92993 513 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 NINJ2Q9NZG7 142 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 NEU2Q9Y3R4 380 aa16.45■□□□□ 0.22
SDF4-207ENST00000494748 RFX1P22670 979 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 KYNUQ16719 465 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 NOP9Q86U38 636 aaKnown RBP16.44■□□□□ 0.22
SDF4-207ENST00000494748 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 MORC4Q8TE76 937 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 NAF1Q96HR8 494 aaKnown RBP16.44■□□□□ 0.22
SDF4-207ENST00000494748 UBE4BO95155 1302 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 LRRC37AA6NMS7 1700 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 IGLV3-22A0A075B6J6 115 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 SLITRK3O94933 977 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 SGPL1O95470 568 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 CYP1A2P05177 515 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 EPC2Q52LR7 807 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 EPS8L1Q8TE68 723 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 C1orf54Q8WWF1 131 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 TAOK3Q9H2K8 898 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 ACP6Q9NPH0 428 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 CHST7Q9NS84 486 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 WRAP73Q9P2S5 460 aaPredicted RBP16.44■□□□□ 0.22
SDF4-207ENST00000494748 CHKBQ9Y259 395 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 T-ENOLP0DO92 83 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 RNASELQ05823 741 aaKnown RBP16.44■□□□□ 0.22
SDF4-207ENST00000494748 PPP3CAQ08209 521 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 ANO7Q6IWH7 933 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms