RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 DDHD2O94830 711 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 GLP2RO95838 553 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 POMCP01189 267 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 ITGA4P13612 1032 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 LIG1P18858 919 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 MCM2P49736 904 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 POU5F1BQ06416 359 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 PDIA5Q14554 519 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 AMHR2Q16671 573 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 DTHD1Q6ZMT9 781 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 FAM178BQ8IXR5 827 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 EFHBQ8N7U6 833 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 SNX29Q8TEQ0 813 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 BSNDQ8WZ55 320 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 MRPL9Q9BYD2 267 aaKnown RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 BHMT2Q9H2M3 363 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 RSAD1Q9HA92 442 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 MIOSQ9NXC5 875 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 CLEC1BQ9P126 229 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 LZTS1Q9Y250 596 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 IPPQ9Y573 584 aa11.81□□□□□ -0.52
COL6A3-214ENST00000493608 TDRD15B5MCY1 1934 aaKnown RBP11.81□□□□□ -0.52
COL6A3-214ENST00000493608 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 E9PMD0 336 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 MBTPS2O43462 519 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 NPTXRO95502 500 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 GALTP07902 379 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 CYP11B2P19099 503 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 NCLP19338 710 aaKnown RBP11.8□□□□□ -0.52
COL6A3-214ENST00000493608 AKAP5P24588 427 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 AXLP30530 894 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 SSTR3P32745 418 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-214ENST00000493608 PPM1AP35813 382 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 SLC11A1P49279 550 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 LAPTM4AQ15012 233 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
COL6A3-214ENST00000493608 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 IGSF22Q8N9C0 903 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 MCPH1Q8NEM0 835 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 VN1R2Q8NFZ6 395 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 URGCPQ8TCY9 931 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 BCL7CQ8WUZ0 217 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-214ENST00000493608 AUTS2Q8WXX7 1259 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-214ENST00000493608 PLIN2Q99541 437 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 APOL5Q9BWW9 433 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 BACH2Q9BYV9 841 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 CSRNP2Q9H175 543 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 CD207Q9UJ71 328 aa11.8□□□□□ -0.52
COL6A3-214ENST00000493608 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-214ENST00000493608 CXCL14O95715 111 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 DUSP6Q16828 381 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 RILPL1Q5EBL4 403 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 PDE12Q6L8Q7 609 aaKnown RBP11.79□□□□□ -0.52
COL6A3-214ENST00000493608 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 GJD3Q8N144 294 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 VPS52Q8N1B4 723 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 IGSF21Q96ID5 467 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 MSLNLQ96KJ4 702 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 ZFP42Q96MM3 310 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 GAD1Q99259 594 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
COL6A3-214ENST00000493608 KIFC3Q9BVG8 833 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 TRIM6Q9C030 488 aaPredicted RBP11.79□□□□□ -0.52
COL6A3-214ENST00000493608 NXF3Q9H4D5 531 aaKnown RBP11.79□□□□□ -0.52
COL6A3-214ENST00000493608 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
COL6A3-214ENST00000493608 KLK14Q9P0G3 267 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 TRIP11Q15643 1979 aa11.79□□□□□ -0.52
COL6A3-214ENST00000493608 MYH11P35749 1972 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 A0A1B0GUA9 196 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 VWA3AA6NCI4 1184 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 ARL5CA6NH57 179 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 LAD1O00515 517 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 NR1I2O75469 434 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 ALDH2P05091 517 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 EDN1P05305 212 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL6A3-214ENST00000493608 MUTP22033 750 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 MLH1P40692 756 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 SCNN1GP51170 649 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 ATP2C1P98194 919 aaPredicted RBP11.78□□□□□ -0.52
COL6A3-214ENST00000493608 SMAD4Q13485 552 aaKnown RBP11.78□□□□□ -0.52
COL6A3-214ENST00000493608 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL6A3-214ENST00000493608 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
COL6A3-214ENST00000493608 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 ZBTB8OSQ8IWT0 167 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 MRPL43Q8N983 215 aaKnown RBP11.78□□□□□ -0.52
COL6A3-214ENST00000493608 CNNM3Q8NE01 707 aa11.78□□□□□ -0.52
COL6A3-214ENST00000493608 DEPTORQ8TB45 409 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms