RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 A0A1B0GUA9 196 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 NPTXRO95502 500 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 GRIK3Q13003 919 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 IER5LQ5T953 404 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 CDCA2Q69YH5 1023 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-208ENST00000493601 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 C15orf39Q6ZRI6 1047 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 CCDC83Q8IWF9 413 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 RNF168Q8IYW5 571 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-208ENST00000493601 ACSF2Q96CM8 615 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-208ENST00000493601 COLEC11Q9BWP8 271 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 FOXP1Q9H334 677 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-208ENST00000493601 GPRC5CQ9NQ84 441 aa18.41■□□□□ 0.54
PTPRU-208ENST00000493601 PRMT7Q9NVM4 692 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-208ENST00000493601 MYO10Q9HD67 2058 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 A0A087WWV3 80 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 MED24O75448 989 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 BRD1O95696 1058 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 EFEMP2O95967 443 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 AKAP5P24588 427 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 RPA1P27694 616 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
PTPRU-208ENST00000493601 POTEGQ6S5H5 508 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 MAEAQ7L5Y9 396 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 OTOP3Q7RTS5 596 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 C2orf40Q9H1Z8 148 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 MAN1C1Q9NR34 630 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 LIMD1Q9UGP4 676 aa18.4■□□□□ 0.54
PTPRU-208ENST00000493601 ARHGEF35A5YM69 484 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 TEX28O15482 410 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 SEC24BO95487 1268 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 GLUD1P00367 558 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 ASGR2P07307 311 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
PTPRU-208ENST00000493601 VCPP55072 806 aaKnown RBP18.39■□□□□ 0.53
PTPRU-208ENST00000493601 DSG1Q02413 1049 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 GNL2Q13823 731 aaKnown RBP18.39■□□□□ 0.53
PTPRU-208ENST00000493601 FAM187BQ17R55 369 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 KIAA0319Q5VV43 1072 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 HAUS3Q68CZ6 603 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 TAS1R1Q7RTX1 841 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 CDR2LQ86X02 465 aaPredicted RBP18.39■□□□□ 0.53
PTPRU-208ENST00000493601 CMASQ8NFW8 434 aaPredicted RBP18.39■□□□□ 0.53
PTPRU-208ENST00000493601 MIOSQ9NXC5 875 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 PARP2Q9UGN5 583 aa18.39■□□□□ 0.53
PTPRU-208ENST00000493601 F8W810 466 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 N4BP3O15049 544 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 MUTP22033 750 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 AVPR2P30518 371 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 TRAPPC10P48553 1259 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 CREMQ03060 361 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 ZNF174Q15697 407 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 TMEM132AQ24JP5 1023 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 TTC38Q5R3I4 469 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 PADI6Q6TGC4 694 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 NOSTRINQ8IVI9 506 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 GSTCDQ8NEC7 633 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 FBXO18Q8NFZ0 1043 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-208ENST00000493601 FZD8Q9H461 694 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 RXFP1Q9HBX9 757 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-208ENST00000493601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPRU-208ENST00000493601 ADAM28Q9UKQ2 775 aa18.38■□□□□ 0.53
PTPRU-208ENST00000493601 NOL7Q9UMY1 257 aaKnown RBP18.38■□□□□ 0.53
PTPRU-208ENST00000493601 C1RP00736 705 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 NUBP1P53384 320 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 PRPF4BQ13523 1007 aaKnown RBP18.37■□□□□ 0.53
PTPRU-208ENST00000493601 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 MAPK6Q16659 721 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 USP41Q3LFD5 358 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 FUT10Q6P4F1 479 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 CYP26C1Q6V0L0 522 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 GPR65Q8IYL9 337 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 ADPGKQ9BRR6 497 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 RHOBTB2Q9BYZ6 727 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 IRF2BPLQ9H1B7 796 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 PDZD7Q9H5P4 517 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 CHST7Q9NS84 486 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 KLK14Q9P0G3 267 aa18.37■□□□□ 0.53
PTPRU-208ENST00000493601 MTCL1Q9Y4B5 1905 aaKnown RBP18.37■□□□□ 0.53
PTPRU-208ENST00000493601 SF3B1O75533 1304 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTPRU-208ENST00000493601 PDGFBP01127 241 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-208ENST00000493601 PRKCBP05771 671 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 CYP11B2P19099 503 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 NAMPTP43490 491 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 TCF15Q12870 199 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 DEPTORQ8TB45 409 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 FEZF2Q8TBJ5 459 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 HDAC7Q8WUI4 952 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 BSNDQ8WZ55 320 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 STAMQ92783 540 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 GPR62Q9BZJ7 368 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 SMOC2Q9H3U7 446 aa18.36■□□□□ 0.53
PTPRU-208ENST00000493601 DAXXQ9UER7 740 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-208ENST00000493601 CCDC195A0A1B0GUA6 201 aa18.35■□□□□ 0.53
PTPRU-208ENST00000493601 CCT6AP40227 531 aaKnown RBP18.35■□□□□ 0.53
PTPRU-208ENST00000493601 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms