RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 FAM20AQ96MK3 541 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 CLIC6Q96NY7 704 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 APOL6Q9BWW8 343 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 PRG3Q9Y2Y8 225 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 IPPQ9Y573 584 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
SOX2-OT-215ENST00000493521 A0A1B0GVL5 298 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 SYCE3A1L190 88 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 C2CD2LO14523 706 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 NRP1O14786 923 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 CUTAO60888 179 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 NR1I2O75469 434 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 CTSAP10619 480 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 GLRA2P23416 452 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 MCM7P33993 719 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 PPM1AP35813 382 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 MLH1P40692 756 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 ALDH7A1P49419 539 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 DNM2P50570 870 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 SCNN1GP51170 649 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 KRT17Q04695 432 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 MBTD1Q05BQ5 628 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 PTPN21Q16825 1174 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 PDE12Q6L8Q7 609 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 GSTCDQ8NEC7 633 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 KLHL5Q96PQ7 755 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 GAD1Q99259 594 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 HSD17B14Q9BPX1 270 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 PAAF1Q9BRP4 392 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 KLK14Q9P0G3 267 aa11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-215ENST00000493521 MED24O75448 989 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 EFEMP2O95967 443 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 SPATA31D3P0C874 917 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 SPATA31C1P0DKV0 1188 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 ARF4P18085 180 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 CMA1P23946 247 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 AKAP5P24588 427 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 ARL2P36404 184 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 TXKP42681 527 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 ZNF445P59923 1031 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 PTENP60484 403 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 GRIN1Q05586 938 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 FAM160A1Q05DH4 1040 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 PTGDRQ13258 359 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 ECM1Q16610 540 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 SPATA31D4Q6ZUB0 917 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 BMP8AQ7Z5Y6 402 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 COLGALT2Q8IYK4 626 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 ENGASEQ8NFI3 743 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 CASP10Q92851 521 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 MTRQ99707 1265 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 MRPL9Q9BYD2 267 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 DOCK6Q96HP0 2047 aa11.3□□□□□ -0.6
SOX2-OT-215ENST00000493521 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 TBX3O15119 743 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 USO1O60763 962 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 RFPL2O75678 378 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 PFKFB1P16118 471 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 GCFC2P16383 781 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 RARRES1P49788 294 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 CLCN4P51793 760 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 NDUFA8P51970 172 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 CAMK4Q16566 473 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 SRGAP1Q7Z6B7 1085 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 RNF168Q8IYW5 571 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 FBXL6Q8N531 539 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms