RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 LDHAL6AQ6ZMR3 332 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 NBPF5PQ86XG9 351 aaPredicted RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 TICAM1Q8IUC6 712 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 MYOCDQ8IZQ8 938 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 ERVK-5Q9HDB9 667 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 PDP2Q9P2J9 529 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 PTPRFP10586 1907 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 FAM170AA1A519 330 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 TTC36A6NLP5 189 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 H0YJX3 145 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 IL2RBP14784 551 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 ALOX15P16050 662 aaPredicted RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 ARHGAP4P98171 946 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 EPC2Q52LR7 807 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 FBXO41Q8TF61 875 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 DYDC1Q8WWB3 177 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 SEL1LQ9UBV2 794 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 GGT7Q9UJ14 662 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 CTDP1Q9Y5B0 961 aaPredicted RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 ALDH2P05091 517 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 ATF7P17544 494 aaPredicted RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 CYP11B2P19099 503 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 PHEXP78562 749 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 CTTNQ14247 550 aaKnown RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 MYLK4Q86YV6 388 aaPredicted RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 PACSIN1Q9BY11 444 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 TYW1Q9NV66 732 aaKnown RBP11.04□□□□□ -0.64
SREBF2-208ENST00000491541 RGL1Q9NZL6 768 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 COG5Q9UP83 839 aa11.04□□□□□ -0.64
SREBF2-208ENST00000491541 GREB1Q4ZG55 1949 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 RPL21P46778 160 aaKnown RBP11.03□□□□□ -0.64
SREBF2-208ENST00000491541 MPP2Q14168 576 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 DNAJC10Q8IXB1 793 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 SMC6Q96SB8 1091 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 GORASP1Q9BQQ3 440 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 VPS28Q9UK41 221 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 MINDY4BA8MYZ0 360 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 CAPN15O75808 1086 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 FTCDO95954 541 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 GNA11P29992 359 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 TM4SF1P30408 202 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 MAGEA6P43360 314 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 CSRP3P50461 194 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 CNTN2Q02246 1040 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 MAP3K10Q02779 954 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 SPIDRQ14159 915 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 AAGABQ6PD74 315 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 ERICH1Q86X53 443 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 PARD3BQ8TEW8 1205 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
SREBF2-208ENST00000491541 FAM84BQ96KN1 310 aaPredicted RBP11.03□□□□□ -0.64
SREBF2-208ENST00000491541 TMOD3Q9NYL9 352 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 UTP11Q9Y3A2 253 aaKnown RBP11.03□□□□□ -0.64
SREBF2-208ENST00000491541 PATJQ8NI35 1801 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 UMODL1Q5DID0 1318 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 TCRBV5S1A1TA0A578 114 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 SUN1O94901 812 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 ASIC2Q16515 512 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 ADAMTS16Q8TE57 1224 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 PIGOQ8TEQ8 1089 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 SIKE1Q9BRV8 207 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 FRMD8P1Q9BZ68 369 aaPredicted RBP11.03□□□□□ -0.64
SREBF2-208ENST00000491541 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
SREBF2-208ENST00000491541 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 TBCCD1Q9NVR7 557 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 VAV3Q9UKW4 847 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 CHKBQ9Y259 395 aa11.03□□□□□ -0.64
SREBF2-208ENST00000491541 WDR46O15213 610 aaKnown RBP11.02□□□□□ -0.64
SREBF2-208ENST00000491541 DIAPH2O60879 1101 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 SOX5P35711 763 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 CD151P48509 253 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 C4orf50Q6ZRC1 276 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 RRAGAQ7L523 313 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 FAM13CQ8NE31 585 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 OR6Y1Q8NGX8 325 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 DUS3LQ96G46 650 aaKnown RBP11.02□□□□□ -0.64
SREBF2-208ENST00000491541 TAOK3Q9H2K8 898 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 CTTNBP2NLQ9P2B4 639 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 EFR3BQ9Y2G0 817 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.64
SREBF2-208ENST00000491541 DPPA5A6NC42 116 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 DAPK3O43293 454 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 FAM189A1O60320 539 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 CTNND1O60716 968 aaKnown RBP11.02□□□□□ -0.65
SREBF2-208ENST00000491541 TTC4O95801 387 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 CCDC166P0CW27 439 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 IFNAR2P48551 515 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 AGMOQ6ZNB7 445 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 KCNK18Q7Z418 384 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 SPDYE1Q8NFV5 336 aaPredicted RBP11.02□□□□□ -0.65
SREBF2-208ENST00000491541 SLC7A14Q8TBB6 771 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
SREBF2-208ENST00000491541 SYT15Q9BQS2 421 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms