RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZBTB8OSQ8IWT0 167 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 ZNF516Q92618 1163 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 NAA15Q9BXJ9 866 aaKnown RBP15.13■□□□□ 0.01
SMPD4-219ENST00000491128 ZNF263O14978 683 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 FANCGO15287 622 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 OFD1O75665 1012 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 HOXD8P13378 290 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 MEA1Q16626 185 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 MFSD14CQ5VZR4 134 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 CDCA2Q69YH5 1023 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 TAS1R2Q8TE23 839 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 ACO2Q99798 780 aaKnown RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 RNF19AQ9NV58 838 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 HDAC6Q9UBN7 1215 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 PHLPP2Q6ZVD8 1323 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 A0A0B4J269 797 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 H0YCG3 227 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 CLSTN1O94985 981 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 TNNI1P19237 187 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 GARTP22102 1010 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 FECHP22830 423 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 MXI1P50539 228 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 PTENP60484 403 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 GFPT1Q06210 699 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 PRPF4BQ13523 1007 aaKnown RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 MYBPC2Q14324 1141 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 NYAP1Q6ZVC0 841 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 LINC01465Q8N7H1 131 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 LMO3Q8TAP4 145 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 FBXL18Q96ME1 805 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 MRPL4Q9BYD3 311 aaKnown RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 TMEM134Q9H6X4 195 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 RBAKQ9NYW8 714 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-219ENST00000491128 DUSP10Q9Y6W6 482 aa15.12■□□□□ 0.01
SMPD4-219ENST00000491128 RCCD1A6NED2 376 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 EXTL3O43909 919 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 CCDC175P0C221 793 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 PSEN2P49810 448 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 CPT1AP50416 773 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 PPP2R3AQ06190 1150 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 SFMBT2Q5VUG0 894 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 HGSNATQ68CP4 663 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 SV2AQ7L0J3 742 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 CCDC42Q96M95 316 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 ACP6Q9NPH0 428 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 CGNQ9P2M7 1197 aaKnown RBP15.11■□□□□ 0.01
SMPD4-219ENST00000491128 DNAJC12Q9UKB3 198 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 GFPT2O94808 682 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 CALCAP01258 141 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 TMOD1P28289 359 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 PURAQ00577 322 aaKnown RBP15.11■□□□□ 0.01
SMPD4-219ENST00000491128 KIF22Q14807 665 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 OSMRQ99650 979 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-219ENST00000491128 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMPD4-219ENST00000491128 DEF6Q9H4E7 631 aa15.11■□□□□ 0.01
SMPD4-219ENST00000491128 UBE2TQ9NPD8 197 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-219ENST00000491128 MAGEB2O15479 319 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 GAS2O43903 313 aaKnown RBP15.1■□□□□ 0.01
SMPD4-219ENST00000491128 CYP2C9P11712 490 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 EFNA5P52803 228 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 TFDP1Q14186 410 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 ZNF568Q3ZCX4 644 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 HAUS4Q9H6D7 363 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 TOM1L1O75674 476 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 GPC3P51654 580 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 FAM47CQ5HY64 1035 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 SPOPLQ6IQ16 392 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 EHBP1Q8NDI1 1231 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 PKNOX2Q96KN3 472 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 FNBP1Q96RU3 617 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 FZD8Q9H461 694 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 STYXL1Q9Y6J8 313 aa15.1■□□□□ 0.01
SMPD4-219ENST00000491128 GPR25O00155 361 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 ACKR2O00590 384 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 ZSCAN12O43309 604 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 USP8P40818 1118 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 SNRPFP62306 86 aaKnown RBP15.09■□□□□ 0.01
SMPD4-219ENST00000491128 DRAP1Q14919 205 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-219ENST00000491128 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 TATDN2Q93075 761 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 WDR24Q96S15 920 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 LACRTQ9GZZ8 138 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 PLCB1Q9NQ66 1216 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 ADAMTS1Q9UHI8 967 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 GUCA1BQ9UMX6 200 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 ABLIM1O14639 778 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 AKR1B10O60218 316 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 DUSP11O75319 330 aaKnown RBP15.09■□□□□ 0.01
SMPD4-219ENST00000491128 PIGRP01833 764 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 KIF11P52732 1056 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms