RNA–Protein interactions for RNA: ENST00000489617.5

CDK18-211, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,190 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-211ENST00000489617 ECM29Q5VYK3 1845 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 ASNSP08243 561 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 GSTA2P09210 222 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 LENG1Q96BZ8 264 aaPredicted RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 PIGSQ96S52 555 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 DDX25Q9UHL0 483 aaKnown RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 AOC2O75106 756 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 HSPA8P11142 646 aaKnown RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 HALP42357 657 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 MSH2P43246 934 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 PEX5P50542 639 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 ZC2HC1CQ53FD0 456 aaPredicted RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 ZNF658Q5TYW1 1059 aaPredicted RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 HAUS1Q96CS2 278 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 PYM1Q9BRP8 204 aaKnown RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 DRC3Q9H069 523 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 TUT1Q9H6E5 874 aaKnown RBP12.4□□□□□ -0.42
CDK18-211ENST00000489617 KANSL2Q9H9L4 492 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 ATAD3AQ9NVI7 634 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
CDK18-211ENST00000489617 MAST2Q6P0Q8 1798 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 ASLP04424 464 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 GNAZP19086 355 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 TCF7P36402 384 aaPredicted RBP12.39□□□□□ -0.43
CDK18-211ENST00000489617 GEMIN4P57678 1058 aaKnown RBP12.39□□□□□ -0.43
CDK18-211ENST00000489617 KRT83P78385 493 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 ATP2C1P98194 919 aaPredicted RBP12.39□□□□□ -0.43
CDK18-211ENST00000489617 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 ODF2Q5BJF6 829 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 RPGRIP1Q96KN7 1286 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
CDK18-211ENST00000489617 KRT86O43790 486 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 BDNFP23560 247 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 IREB2P48200 963 aaKnown RBP12.39□□□□□ -0.43
CDK18-211ENST00000489617 IQCKQ8N0W5 287 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 SIX5Q8N196 739 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 ANKS4BQ8N8V4 417 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 DNAJC9Q8WXX5 260 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 KLHL29Q96CT2 875 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 SPATA16Q9BXB7 569 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 CCDC68Q9H2F9 335 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 GDAQ9Y2T3 454 aa12.39□□□□□ -0.43
CDK18-211ENST00000489617 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 RPN1P04843 607 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 ADARP55265 1226 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 UBXN2AP68543 259 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 PDXDC2PQ6P474 469 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 EMBQ6PCB8 327 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 FAM47EQ6ZV65 393 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 MB21D1Q8N884 522 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 ECT2Q9H8V3 914 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 SART1O43290 800 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 CYP1A1P04798 512 aaPredicted RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 MCM7P33993 719 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 PRCPP42785 496 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 NCALDP61601 193 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 HERVK_113P62684 666 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 FKBP1CQ5VVH2 108 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 PAPD7Q5XG87 772 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 PHLDB3Q6NSJ2 640 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 TMEM214Q6NUQ4 689 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 ITGB1BP2Q9UKP3 347 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 PSME4Q14997 1843 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 FGRP09769 529 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 DRD4P21917 467 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 GALK1P51570 392 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 HPCAP84074 193 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 MAP7Q14244 749 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 RCN2Q14257 317 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 SH3D19Q5HYK7 790 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 IRGCQ6NXR0 463 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 DHTKD1Q96HY7 919 aaPredicted RBP12.38□□□□□ -0.43
CDK18-211ENST00000489617 NDEL1Q9GZM8 345 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 JADE2Q9NQC1 790 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 SIPA1L1O43166 1804 aa12.38□□□□□ -0.43
CDK18-211ENST00000489617 LGALS16A8MUM7 142 aa12.37□□□□□ -0.43
CDK18-211ENST00000489617 SLC26A4O43511 780 aa12.37□□□□□ -0.43
CDK18-211ENST00000489617 CTNND1O60716 968 aaKnown RBP12.37□□□□□ -0.43
CDK18-211ENST00000489617 GBP1P32455 592 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms