RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, human

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG4A-208	ENST00000489247	FILIP1	Q7Z7B0	1213 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	CCAR2	Q8N163	923 aa	Known RBP	6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	SYT2	Q8N9I0	419 aa	Predicted RBP	6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	TC2N	Q8N9U0	490 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	ANKRD20A12P	Q8NF67	263 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	ERMN	Q8TAM6	284 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	ZNF507	Q8TCN5	953 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	NEK9	Q8TD19	979 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	IQCD	Q96DY2	449 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	CDK5RAP3	Q96JB5	506 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	UBL7	Q96S82	380 aa	Predicted RBP	6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	RIT2	Q99578	217 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	HSD17B14	Q9BPX1	270 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	KRTAP4-5	Q9BYR2	181 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	TUFT1	Q9NNX1	390 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	FBXO28	Q9NVF7	368 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	GGT7	Q9UJ14	662 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	GDA	Q9Y2T3	454 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	PCDHGB7	Q9Y5F8	929 aa		6.15	□□□□□ -1.42
ATG4A-208	ENST00000489247	ASTN2	O75129	1339 aa	Predicted RBP	6.15	□□□□□ -1.43
ATG4A-208	ENST00000489247	KCNJ18	B7U540	433 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCP110	O43303	1012 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	MED24	O75448	989 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	LYPLA2	O95372	231 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	TPM2	P07951	284 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	PLA2G4B	P0C869	781 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	GLB1	P16278	677 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	CYP11B2	P19099	503 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	CDK11B	P21127	795 aa	Known RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCT6A	P40227	531 aa	Known RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	ST13	P50502	369 aa	Known RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	PMS1	P54277	932 aa	Known RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	STX17	P56962	302 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	SNAP25	P60880	206 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	KCNJ12	Q14500	433 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	EPHA7	Q15375	998 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	BMT2	Q1RMZ1	405 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	TKFC	Q3LXA3	575 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	SUPT20HL1	Q3ZLR7	823 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	PRR16	Q569H4	304 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	FIGN	Q5HY92	759 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	ANGEL2	Q5VTE6	544 aa	Known RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	PCNX4	Q63HM2	1172 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	E4F1	Q66K89	784 aa	Predicted RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	KLHL10	Q6JEL2	608 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247		Q6ZS46	218 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	LRRC55	Q6ZSA7	311 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	CATSPER3	Q86XQ3	398 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	FAM114A1	Q8IWE2	563 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	TMEM174	Q8WUU8	243 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	TP53INP1	Q96A56	240 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	FEZ1	Q99689	392 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	MXRA8	Q9BRK3	442 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	NAA15	Q9BXJ9	866 aa	Known RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	WDR11	Q9BZH6	1224 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	KCND2	Q9NZV8	630 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCPG1	Q9ULG6	757 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	UBIAD1	Q9Y5Z9	338 aa		6.14	□□□□□ -1.43
ATG4A-208	ENST00000489247	GOLGA6L9	A6NEM1	432 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	AKR1B15	C9JRZ8	316 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	VWA5A	O00534	786 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	TEX33	O43247	280 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	MARCH6	O60337	910 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	MFAP3L	O75121	409 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	ZBED4	O75132	1171 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	KIF20A	O95235	890 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	EYA4	O95677	639 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	FGFR1OP	O95684	399 aa	Known RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	CFB	P00751	764 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	FCER1A	P12319	257 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	XRCC5	P13010	732 aa	Known RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	MAOB	P27338	520 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	HOXA13	P31271	388 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	DNM2	P50570	870 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	ZNF131	P52739	623 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	COASY	Q13057	564 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCDC85B	Q15834	202 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	NFIL3	Q16649	462 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	TPD52L1	Q16890	204 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	EDRF1	Q3B7T1	1238 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	ARSH	Q5FYA8	562 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	FAM26F	Q5R3K3	315 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	ANKRD40	Q6AI12	368 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCDC174	Q6PII3	467 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	LBX2	Q6XYB7	198 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	HS2ST1	Q7LGA3	356 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCDC84	Q86UT8	332 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	CNGA4	Q8IV77	575 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	CCDC65	Q8IXS2	484 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	MB21D1	Q8N884	522 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	RDM1	Q8NG50	284 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	TBC1D5	Q92609	795 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	ERGIC2	Q96RQ1	377 aa		6.13	□□□□□ -1.43
ATG4A-208	ENST00000489247	WRNIP1	Q96S55	665 aa		6.13	□□□□□ -1.43

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