RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 C16orf70Q9BSU1 422 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 NUCKS1Q9H1E3 243 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 ZNHIT6Q9NWK9 470 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 CEP72Q9P209 647 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 TISP43B9A030 160 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 ANKRD63C9JTQ0 380 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 KIAA0391O15091 583 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 ZSCAN12O43309 604 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 OFD1O75665 1012 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 TIMP1P01033 207 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 HNRNPH3P31942 346 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 CYP2C18P33260 490 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 EFNA5P52803 228 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 CDK17Q00537 523 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 ENPEPQ07075 957 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 GBP6Q6ZN66 633 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 BICD1Q96G01 975 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 LSM14BQ9BX40 385 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 RNPEPQ9H4A4 650 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
NELFE-209ENST00000488426 TRMT13Q9NUP7 481 aaKnown RBP13.84□□□□□ -0.19
NELFE-209ENST00000488426 SOWAHDA6NJG2 315 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 A6NJR5 290 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 K7ERI5 159 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 MAGEB2O15479 319 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 ADSSP30520 456 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
NELFE-209ENST00000488426 EXOC3L4Q17RC7 722 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
NELFE-209ENST00000488426 SLC39A4Q6P5W5 647 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 PPP1R13BQ96KQ4 1090 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 FBXL18Q96ME1 805 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 C2orf40Q9H1Z8 148 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 STYXL1Q9Y6J8 313 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 UNC80Q8N2C7 3258 aa13.83□□□□□ -0.2
NELFE-209ENST00000488426 GOLGA6L9A6NEM1 432 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 USP27XA6NNY8 438 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 H3BRB1 525 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 EPHB6O15197 1021 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 ASAP2O43150 1006 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 N4BP1O75113 896 aaKnown RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 C22orf31O95567 290 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 ZNF286BP0CG31 522 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 ACRP10323 421 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 INSRRP14616 1297 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 CSF2RAP15509 400 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 FMO5P49326 533 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 LIG4P49917 911 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 VAMP7P51809 220 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 LAMTOR4Q0VGL1 99 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 DRP2Q13474 957 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 TFDP1Q14186 410 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 RAD9BQ6WBX8 426 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 CACNA2D4Q7Z3S7 1137 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 BAP1Q92560 729 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 VWCEQ96DN2 955 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 CRACR2AQ9BSW2 395 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 TUT1Q9H6E5 874 aaKnown RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 SUGCTQ9HAC7 445 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 KIAA1586Q9HCI6 787 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 TRMT1Q9NXH9 659 aaKnown RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 SUCLA2Q9P2R7 463 aaPredicted RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 PLAGL2Q9UPG8 496 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 PPP2R2CQ9Y2T4 447 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 DAAM1Q9Y4D1 1078 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 KIF2AO00139 706 aaPredicted RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 P4HA2O15460 535 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 CABYRO75952 493 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 NOL4O94818 638 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 CYP2C9P11712 490 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 PON1P27169 355 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 SNRNP35Q16560 246 aaKnown RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 MFSD5Q6N075 450 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 EFCAB12Q6NXP0 572 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 WDR59Q6PJI9 974 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 ZPBP2Q6X784 338 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 NYAP1Q6ZVC0 841 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 USP37Q86T82 979 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 RDH13Q8NBN7 331 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 SYN2Q92777 582 aaPredicted RBP13.82□□□□□ -0.2
NELFE-209ENST00000488426 GANQ9H2C0 597 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 GCNT4Q9P109 453 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
NELFE-209ENST00000488426 SCN10AQ9Y5Y9 1956 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 PMM2O15305 246 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 ZEB2O60315 1214 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 TUBB4AP04350 444 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 CCDC175P0C221 793 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 CPT1AP50416 773 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms