RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SLC5A5Q92911 643 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 MFSD3Q96ES6 412 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 CEP95Q96GE4 821 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 FEZ1Q99689 392 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 SERHL2Q9H4I8 314 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 DKK2Q9UBU2 259 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 TMEM200CA6NKL6 621 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 PRR5-ARHGAP8B1AHC4 643 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 WNT10BO00744 389 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 NDUFA10O95299 355 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 NUDT3O95989 172 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 HSP90B1P14625 803 aaKnown RBP6.14□□□□□ -1.43
SMC4-219ENST00000487747 ZSCAN20P17040 1043 aaPredicted RBP6.14□□□□□ -1.43
SMC4-219ENST00000487747 LGALS4P56470 323 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 HECTD2Q5U5R9 776 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 DPY19L2P1Q6NXN4 242 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 Q6YL49 198 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 OR10H5Q8NGA6 315 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 SNX33Q8WV41 574 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 NEU1Q99519 415 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 WDR11Q9BZH6 1224 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 KCTD10Q9H3F6 313 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 SYNPO2LQ9H987 977 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 CDY2AQ9Y6F7 541 aa6.14□□□□□ -1.43
SMC4-219ENST00000487747 ADCY6O43306 1168 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 B3GALT2O43825 422 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 RAB11FIP3O75154 756 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 CTSSP25774 331 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 ID4P47928 161 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 BEAN1Q3B7T3 259 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 PDCD4Q53EL6 469 aaKnown RBP6.13□□□□□ -1.43
SMC4-219ENST00000487747 MFSD14BQ5SR56 506 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 METRNLQ641Q3 311 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 IQSEC1Q6DN90 963 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 KIAA0907Q7Z7F0 614 aaPredicted RBP6.13□□□□□ -1.43
SMC4-219ENST00000487747 C11orf74Q86VG3 221 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 RASSF3Q86WH2 238 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 EAF2Q96CJ1 260 aaPredicted RBP6.13□□□□□ -1.43
SMC4-219ENST00000487747 CDC5LQ99459 802 aaKnown RBP6.13□□□□□ -1.43
SMC4-219ENST00000487747 TOPORSQ9NS56 1045 aaPredicted RBP6.13□□□□□ -1.43
SMC4-219ENST00000487747 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
SMC4-219ENST00000487747 NOC2LQ9Y3T9 749 aaKnown RBP6.13□□□□□ -1.43
SMC4-219ENST00000487747 TBKBP1A7MCY6 615 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 RNASET2O00584 256 aaKnown RBP6.12□□□□□ -1.43
SMC4-219ENST00000487747 RHOBTB3O94955 611 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 ATP13A4Q4VNC1 1196 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 C19orf54Q5BKX5 351 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 PRAMEF14Q5SWL7 426 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 DRICH1Q6PGQ1 229 aaPredicted RBP6.12□□□□□ -1.43
SMC4-219ENST00000487747 OLFML1Q6UWY5 402 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 SLC35B2Q8TB61 432 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
SMC4-219ENST00000487747 DCLRE1CQ96SD1 692 aaKnown RBP6.12□□□□□ -1.43
SMC4-219ENST00000487747 TOR3AQ9H497 397 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 GPRC5DQ9NZD1 345 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 MAP3K2Q9Y2U5 619 aa6.12□□□□□ -1.43
SMC4-219ENST00000487747 UNC119BA6NIH7 251 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 PDE8AO60658 829 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 MYCLP1P12525 358 aaPredicted RBP6.11□□□□□ -1.43
SMC4-219ENST00000487747 BPIP17213 487 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 FAM102AQ5T9C2 384 aaPredicted RBP6.11□□□□□ -1.43
SMC4-219ENST00000487747 ARHGEF19Q8IW93 802 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 CMIPQ8IY22 773 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 REPS2Q8NFH8 660 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 RSAD2Q8WXG1 361 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 ADAM2Q99965 735 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 WNT8AQ9H1J5 351 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 CYP4F11Q9HBI6 524 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 SYBUQ9NX95 663 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 POGKQ9P215 609 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 ZNHIT2Q9UHR6 403 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 KCNG1Q9UIX4 513 aa6.11□□□□□ -1.43
SMC4-219ENST00000487747 NEMP1O14524 444 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 KIAA0355O15063 1070 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 PPFIA4O75335 1185 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 CLK3P49761 638 aaKnown RBP6.1□□□□□ -1.43
SMC4-219ENST00000487747 BMT2Q1RMZ1 405 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 CMTR2Q8IYT2 770 aaKnown RBP6.1□□□□□ -1.43
SMC4-219ENST00000487747 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 FBXO18Q8NFZ0 1043 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 PRDM13Q9H4Q3 707 aa6.1□□□□□ -1.43
SMC4-219ENST00000487747 EPN1Q9Y6I3 576 aaPredicted RBP6.1□□□□□ -1.43
SMC4-219ENST00000487747 GAGE12BA1L429 117 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 B5MCH6 92 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 MEF2AQ02078 507 aaPredicted RBP6.09□□□□□ -1.43
SMC4-219ENST00000487747 TP53BP2Q13625 1128 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 EFCAB12Q6NXP0 572 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 CPEB3Q8NE35 698 aaKnown RBP6.09□□□□□ -1.43
SMC4-219ENST00000487747 TFAP2CQ92754 450 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 DPP7Q9UHL4 492 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 CLCA2Q9UQC9 943 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 USP15Q9Y4E8 981 aaPredicted RBP6.09□□□□□ -1.43
SMC4-219ENST00000487747 TNFRSF18Q9Y5U5 241 aa6.09□□□□□ -1.43
SMC4-219ENST00000487747 COL11A2P13942 1736 aaPredicted RBP6.08□□□□□ -1.44
SMC4-219ENST00000487747 PNPLA7Q6ZV29 1317 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 CCT2P78371 535 aaKnown RBP6.08□□□□□ -1.44
SMC4-219ENST00000487747 CDK17Q00537 523 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 FOXI1Q12951 378 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms