RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 PIGRP01833 764 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 VTNP04004 478 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 TNNT1P13805 278 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 TMOD1P28289 359 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 FMO5P49326 533 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 KIAA0319LQ8IZA0 1049 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 ZNF668Q96K58 619 aaPredicted RBP15.45■□□□□ 0.06
CUX1-209ENST00000487284 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 DESI2Q9BSY9 194 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
CUX1-209ENST00000487284 PCIF1Q9H4Z3 704 aa15.45■□□□□ 0.06
CUX1-209ENST00000487284 ZNHIT6Q9NWK9 470 aaKnown RBP15.45■□□□□ 0.06
CUX1-209ENST00000487284 ANK1P16157 1881 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 PHLPP2Q6ZVD8 1323 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 KRT13P13646 458 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 GARTP22102 1010 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 PON1P27169 355 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 PTPN11Q06124 597 aaPredicted RBP15.44■□□□□ 0.06
CUX1-209ENST00000487284 MXD4Q14582 209 aaPredicted RBP15.44■□□□□ 0.06
CUX1-209ENST00000487284 EXOC3L4Q17RC7 722 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 SLC43A3Q8NBI5 491 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 DEPTORQ8TB45 409 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 SYN2Q92777 582 aaPredicted RBP15.44■□□□□ 0.06
CUX1-209ENST00000487284 FBXL18Q96ME1 805 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 PPP1R16BQ96T49 567 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 TMEM106CQ9BVX2 250 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 TMEM134Q9H6X4 195 aa15.44■□□□□ 0.06
CUX1-209ENST00000487284 LRRC53A6NM62 1247 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 HNRNPDLO14979 420 aaKnown RBP15.43■□□□□ 0.06
CUX1-209ENST00000487284 TUBB4AP04350 444 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 ADRB2P07550 413 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 SRGAP2CP0DJJ0 459 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 TMEM62Q0P6H9 643 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 PTGISQ16647 500 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 RNF149Q8NC42 400 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 DIS3LQ8TF46 1054 aaKnown RBP15.43■□□□□ 0.06
CUX1-209ENST00000487284 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 SIX2Q9NPC8 291 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 TRMT13Q9NUP7 481 aaKnown RBP15.43■□□□□ 0.06
CUX1-209ENST00000487284 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 FBXL5Q9UKA1 691 aa15.43■□□□□ 0.06
CUX1-209ENST00000487284 EPN1Q9Y6I3 576 aaPredicted RBP15.43■□□□□ 0.06
CUX1-209ENST00000487284 ARVCFO00192 962 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 ASAP2O43150 1006 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 NDUFA10O95299 355 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 TRIM49P0CI25 452 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 TRIM49CP0CI26 452 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 SLC9A1P19634 815 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 GPC3P51654 580 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 VAMP7P51809 220 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 POLR2FP61218 127 aaKnown RBP15.42■□□□□ 0.06
CUX1-209ENST00000487284 ENPEPQ07075 957 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 STRN3Q13033 797 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 TAF2Q6P1X5 1199 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 RRAGAQ7L523 313 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 SERINC5Q86VE9 423 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 CCDC170Q8IYT3 715 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 RDH13Q8NBN7 331 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 ZSWIM2Q8NEG5 633 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 WNT8BQ93098 351 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 SENP6Q9GZR1 1112 aaPredicted RBP15.42■□□□□ 0.06
CUX1-209ENST00000487284 NLRC4Q9NPP4 1024 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 STYXL1Q9Y6J8 313 aa15.42■□□□□ 0.06
CUX1-209ENST00000487284 K7ERI5 159 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 KIAA0391O15091 583 aaKnown RBP15.41■□□□□ 0.06
CUX1-209ENST00000487284 COL6A1P12109 1028 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 LIG4P49917 911 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 EFNA5P52803 228 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 NLRP11P59045 1033 aaKnown RBP15.41■□□□□ 0.06
CUX1-209ENST00000487284 MYL7Q01449 175 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 APBA1Q02410 837 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 TFDP1Q14186 410 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 SNRNP35Q16560 246 aaKnown RBP15.41■□□□□ 0.06
CUX1-209ENST00000487284 CBWD6Q4V339 395 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 CBWD3Q5JTY5 395 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 CBWD5Q5RIA9 395 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 KLHDC7AQ5VTJ3 777 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 CDCA2Q69YH5 1023 aaPredicted RBP15.41■□□□□ 0.06
CUX1-209ENST00000487284 PLEKHO2Q8TD55 490 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 POMGNT1Q8WZA1 660 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 BICD1Q96G01 975 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 TRPV6Q9H1D0 765 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 MYO6Q9UM54 1294 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 NOD1Q9Y239 953 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 A0A087WZ62 844 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 PMM2O15305 246 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 P4HA2O15460 535 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 B4GALT4O60513 344 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 N4BP1O75113 896 aaKnown RBP15.41■□□□□ 0.06
CUX1-209ENST00000487284 ACTN1P12814 892 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 UCHL3P15374 230 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
CUX1-209ENST00000487284 CDK7P50613 346 aa15.41■□□□□ 0.06
CUX1-209ENST00000487284 ATN1P54259 1190 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms