RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 MYBP10242 640 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 SCP2P22307 547 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 ABCD1P33897 745 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 OSTNP61366 133 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 ERVK-21P61565 698 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 GTF2BQ00403 316 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
HPS4-214ENST00000485842 NOMO2Q5JPE7 1267 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
HPS4-214ENST00000485842 CEP120Q8N960 986 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 GLIS3Q8NEA6 775 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 CCDC34Q96HJ3 373 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 ZBTB45Q96K62 511 aaPredicted RBP12.98□□□□□ -0.33
HPS4-214ENST00000485842 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
HPS4-214ENST00000485842 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 ST6GALNAC4Q9H4F1 302 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
HPS4-214ENST00000485842 EXOC1Q9NV70 894 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 SNTG2Q9NY99 539 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 MYO9BQ13459 2157 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 RFXAPO00287 272 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
HPS4-214ENST00000485842 NR1I2O75469 434 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 OFD1O75665 1012 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 TOM1L1O75674 476 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 PPP1R37O75864 691 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 RECQL4O94761 1208 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 PRPF6O94906 941 aaKnown RBP12.97□□□□□ -0.33
HPS4-214ENST00000485842 MCF2P10911 925 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 PROZP22891 400 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 RNASELQ05823 741 aaKnown RBP12.97□□□□□ -0.33
HPS4-214ENST00000485842 ALCAMQ13740 583 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
HPS4-214ENST00000485842 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 STXBP4Q6ZWJ1 553 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 ENGASEQ8NFI3 743 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 MYLIPQ8WY64 445 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 RPS6KC1Q96S38 1066 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 GAD1Q99259 594 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 IKZF4Q9H2S9 585 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 PTPRHQ9HD43 1115 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 UBN1Q9NPG3 1134 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 TBC1D13Q9NVG8 400 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 MTMR10Q9NXD2 777 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 RWDD3Q9Y3V2 267 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
HPS4-214ENST00000485842 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
HPS4-214ENST00000485842 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 ARL5CA6NH57 179 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 TISP43B9A030 160 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 ABLIM1O14639 778 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 CLDN3O15551 220 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 KLRC4O43908 158 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 KINO60870 393 aaKnown RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.33
HPS4-214ENST00000485842 POMCP01189 267 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 PIGRP01833 764 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 MYL1P05976 194 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 BMPR1AP36894 532 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 PBX3P40426 434 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 SCNN1GP51170 649 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 KCNA1Q09470 495 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 POSTNQ15063 836 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 SLC39A4Q6P5W5 647 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 KCNN1Q92952 543 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
HPS4-214ENST00000485842 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 CWH43Q9H720 699 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 SLC39A2Q9NP94 309 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
HPS4-214ENST00000485842 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms