RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TNFRSF10AO00220 468 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 STX6O43752 255 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 TSPAN1O60635 241 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 USO1O60763 962 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 EYA4O95677 639 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 EFEMP2O95967 443 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 RB1P06400 928 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 CYP11B2P19099 503 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 GTF2F1P35269 517 aaKnown RBP eCLIP6.35□□□□□ -1.39
CUX1-208ENST00000485792 IRS1P35568 1242 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 NASPP49321 788 aaPredicted RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 DNM2P50570 870 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SH3BP2P78314 561 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SKOR1P84550 965 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 RBM10P98175 930 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 MBTD1Q05BQ5 628 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 FOXC1Q12948 553 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 PAK2Q13177 524 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SLC39A14Q15043 492 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 ARSHQ5FYA8 562 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 XKR9Q5GH70 373 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SPECC1Q5M775 1068 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 FAM102BQ5T8I3 360 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 EEF1DP3Q658K8 133 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 HAUS3Q68CZ6 603 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 CMTR2Q8IYT2 770 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 MYOCDQ8IZQ8 938 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SMG8Q8ND04 991 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 MCPH1Q8NEM0 835 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 VN1R2Q8NFZ6 395 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 PSPC1Q8WXF1 523 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 LPPQ93052 612 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 P2RX5Q93086 422 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 TGS1Q96RS0 853 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 MAP7D2Q96T17 732 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 ADAM2Q99965 735 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 EIF2AQ9BY44 585 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 INO80BQ9C086 356 aaPredicted RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 CCSER1Q9C0I3 900 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 ZSCAN16Q9H4T2 348 aaPredicted RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 CWH43Q9H720 699 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 AGPAT5Q9NUQ2 364 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 SRPRBQ9Y5M8 271 aaKnown RBP6.35□□□□□ -1.39
CUX1-208ENST00000485792 MTCH2Q9Y6C9 303 aa6.35□□□□□ -1.39
CUX1-208ENST00000485792 A0A1B0GUA9 196 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 TISP43B9A030 160 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 H3BQV1 296 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 FBXO45P0C2W1 286 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 AXLP30530 894 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 LONP1P36776 959 aaKnown RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 BMPR1AP36894 532 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 PHKA2P46019 1235 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 POLGP54098 1239 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 SLC12A3P55017 1021 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 SF3A1Q15459 793 aaKnown RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 NAB2Q15742 525 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 LONRF3Q496Y0 759 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 EPC2Q52LR7 807 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 AXDND1Q5T1B0 1012 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 FOXD4L5Q5VV16 416 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 RINT1Q6NUQ1 792 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 AGMOQ6ZNB7 445 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 TRIM67Q6ZTA4 783 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 ADGRD2Q7Z7M1 963 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 ECHDC2Q86YB7 292 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 RHPN2Q8IUC4 686 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 TMEM192Q8IY95 271 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 CEP120Q8N960 986 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 SYT2Q8N9I0 419 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 LINC00301Q8NCQ3 95 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 ERMNQ8TAM6 284 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 FOXD4L4Q8WXT5 416 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 FOXJ1Q92949 421 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 EPSTI1Q96J88 318 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 FAM84AQ96KN4 292 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 PRIMPOLQ96LW4 560 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 NLRP4Q96MN2 994 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 CASD1Q96PB1 797 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 PLIN2Q99541 437 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 OCSTAMPQ9BR26 566 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 PLVAPQ9BX97 442 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 GCOM2Q9BZD3 368 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 RAB34Q9BZG1 259 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 POLR3FQ9H1D9 316 aaPredicted RBP6.34□□□□□ -1.39
CUX1-208ENST00000485792 C17orf75Q9HAS0 396 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 ATP6V0A4Q9HBG4 840 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 MIOSQ9NXC5 875 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 DACT1Q9NYF0 836 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 KCND2Q9NZV8 630 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 CDH22Q9UJ99 828 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 MTUS1Q9ULD2 1270 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 KIAA1024Q9UPX6 916 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 AKT3Q9Y243 479 aa6.34□□□□□ -1.39
CUX1-208ENST00000485792 GINS2Q9Y248 185 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms