RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 VN1R2Q8NFZ6 395 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 TCF25Q9BQ70 676 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 C22orf23Q9BZE7 217 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
HLA-B-253ENST00000481849 ELAC1Q9H777 363 aaKnown RBP10.1□□□□□ -0.79
HLA-B-253ENST00000481849 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 FAM86C1Q9NVL1 165 aa10.1□□□□□ -0.79
HLA-B-253ENST00000481849 DDX25Q9UHL0 483 aaKnown RBP10.1□□□□□ -0.79
HLA-B-253ENST00000481849 USP15Q9Y4E8 981 aaPredicted RBP10.1□□□□□ -0.79
HLA-B-253ENST00000481849 A0A087WZ62 844 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 CYSRT1A8MQ03 144 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 HIDE1A8MVS5 230 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 NT5C1B-RDH14C9J2C7 533 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 STBD1O95210 358 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 EYA4O95677 639 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 SP100P23497 879 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 TECP42680 631 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 TCF15Q12870 199 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 COASYQ13057 564 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 TARBP2Q15633 366 aaKnown RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 NPY5RQ15761 445 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 DUSP6Q16828 381 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 XKR3Q5GH77 459 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 KCNT2Q6UVM3 1135 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 KRT25Q7Z3Z0 450 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 RHPN2Q8IUC4 686 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 KSR1Q8IVT5 923 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 LRRC43Q8N309 656 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 DAGLBQ8NCG7 672 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 SMRP1Q8NCR6 262 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 ETNPPLQ8TBG4 499 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 MRPS27Q92552 414 aaKnown RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 LPPQ93052 612 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 ZNF274Q96GC6 653 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 NLRP4Q96MN2 994 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 FDXACB1Q9BRP7 624 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 GCOM2Q9BZD3 368 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 GJB4Q9NTQ9 266 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 SUCLA2Q9P2R7 463 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 PUF60Q9UHX1 559 aaKnown RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-253ENST00000481849 ZZEF1O43149 2961 aa10.09□□□□□ -0.79
HLA-B-253ENST00000481849 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 CYP3A7-CYP3A51PA0A087WV96 503 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 CCDC194A0A1B0GVG4 234 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 M0R2N6 131 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 EML1O00423 815 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 FSCN2O14926 492 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 CYP3A7P24462 503 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 RFC5P40937 340 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 DNM2P50570 870 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 KRT17Q04695 432 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 SCRN1Q12765 414 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
HLA-B-253ENST00000481849 FAM43BQ6ZT52 329 aaPredicted RBP10.08□□□□□ -0.8
HLA-B-253ENST00000481849 HFE2Q6ZVN8 426 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 ANO5Q75V66 913 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 TMC7Q7Z402 723 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 RDM1Q8NG50 284 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 NIFKQ9BYG3 293 aaKnown RBP10.08□□□□□ -0.8
HLA-B-253ENST00000481849 TM6SF1Q9BZW5 370 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 PIN4Q9Y237 131 aaKnown RBP10.08□□□□□ -0.8
HLA-B-253ENST00000481849 INPP5FQ9Y2H2 1132 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 SPEGQ15772 3267 aa10.08□□□□□ -0.8
HLA-B-253ENST00000481849 A0A0U1RQF3 1178 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 SLC35F4A4IF30 521 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 MARCH6O60337 910 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 CCNT1O60563 726 aaKnown RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 MAFO75444 373 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 CDKL5O76039 1030 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 ATF7P17544 494 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 PPM1AP35813 382 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 NPEPPSP55786 919 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 BCAR1P56945 870 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 PSMC5P62195 406 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 PLCB3Q01970 1234 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 GALNT17Q6IS24 598 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 PDE12Q6L8Q7 609 aaKnown RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 ANKRD54Q6NXT1 300 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 B3GNT9Q6UX72 402 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 ASCL5Q7RTU5 278 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 CATSPER4Q7RTX7 472 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 NEK8Q86SG6 692 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 SLC39A11Q8N1S5 342 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 NANOS1Q8WY41 292 aaKnown RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 CEP170P1Q96L14 293 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 MBOAT7Q96N66 472 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 CEP89Q96ST8 783 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 CDCA3Q99618 268 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 PHF20Q9BVI0 1012 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 DACT1Q9NYF0 836 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms