RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 DPYSL4O14531 572 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 PRKCBP05771 671 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 XRCC6P12956 609 aaKnown RBP eCLIP9.16□□□□□ -0.94
ERCC8-205ENST00000477893 CYP11B2P19099 503 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 LTBRP36941 435 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 SLC11A1P49279 550 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 SCNN1GP51170 649 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 ATP2C1P98194 919 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-205ENST00000477893 UBE3AQ05086 875 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 AMHR2Q16671 573 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 TSR1Q2NL82 804 aaKnown RBP9.16□□□□□ -0.94
ERCC8-205ENST00000477893 FAM43BQ6ZT52 329 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-205ENST00000477893 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 IGSF22Q8N9C0 903 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 VN1R2Q8NFZ6 395 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 RASSF8Q8NHQ8 419 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 TMEM169Q96HH4 297 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 CDK5RAP3Q96JB5 506 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 FAM193BQ96PV7 902 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-205ENST00000477893 GAD1Q99259 594 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 RUSC1Q9BVN2 902 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 CSRNP2Q9H175 543 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 NRDE2Q9H7Z3 1164 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 PARP2Q9UGN5 583 aa9.16□□□□□ -0.94
ERCC8-205ENST00000477893 GRXCR2A6NFK2 248 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 ARL5CA6NH57 179 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CCDC169A6NNP5 214 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 LAD1O00515 517 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 FSCN2O14926 492 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 ZNF623O75123 536 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 HIP1RO75146 1068 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 DDHD2O94830 711 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 GLP2RO95838 553 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 EDN1P05305 212 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 NCLP19338 710 aaKnown RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 GGCXP38435 758 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 OR1G1P47890 313 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 PLCB3Q01970 1234 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CEBPZQ03701 1054 aaKnown RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 ADAM15Q13444 863 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 PRPF4BQ13523 1007 aaKnown RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 DHX8Q14562 1220 aaKnown RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 SMC1AQ14683 1233 aaKnown RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 DUSP6Q16828 381 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 PKDCCQ504Y2 493 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 SLC27A1Q6PCB7 646 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 TRIM67Q6ZTA4 783 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 VPS52Q8N1B4 723 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 EFHBQ8N7U6 833 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 RABGGTAQ92696 567 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CCDC51Q96ER9 411 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 IFT74Q96LB3 600 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 MMTAG2Q9BU76 263 aaKnown RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 TRAIPQ9BWF2 469 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 C2orf40Q9H1Z8 148 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CD320Q9NPF0 282 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 PRMT7Q9NVM4 692 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CLEC1BQ9P126 229 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CACNG4Q9UBN1 327 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CD207Q9UJ71 328 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 DNM3Q9UQ16 869 aa9.15□□□□□ -0.94
ERCC8-205ENST00000477893 CNTNAP2Q9UHC6 1331 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 NPHP3-ACAD11A0A0J9YXS1 232 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 F8W810 466 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 C2CD2LO14523 706 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 MAP3K7O43318 606 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 MBTPS2O43462 519 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 NCK2O43639 380 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 EYA4O95677 639 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 GALTP07902 379 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
ERCC8-205ENST00000477893 SP100P23497 879 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-205ENST00000477893 AXLP30530 894 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 PRPHP41219 470 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 NAMPTP43490 491 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 PEX3P56589 373 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 GRIN1Q05586 938 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 CUL4AQ13619 759 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 PDIA5Q14554 519 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 COL19A1Q14993 1142 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 PPP2R5AQ15172 486 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 MAPK6Q16659 721 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-205ENST00000477893 CDCA2Q69YH5 1023 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-205ENST00000477893 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 MRPL10Q7Z7H8 261 aaKnown RBP9.14□□□□□ -0.95
ERCC8-205ENST00000477893 CABP7Q86V35 215 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 HACE1Q8IYU2 909 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-205ENST00000477893 KIFAP3Q92845 792 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 IGSF21Q96ID5 467 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 PNMA5Q96PV4 448 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 RPS6KC1Q96S38 1066 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 VN1R3Q9BXE9 311 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 NFKBIZQ9BYH8 718 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 PDZD7Q9H5P4 517 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 SNTG2Q9NY99 539 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms