RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TMEM175Q9BSA9 504 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 TIPINQ9BVW5 301 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 KLK14Q9P0G3 267 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 PARP2Q9UGN5 583 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 K7ERI5 159 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 TNFRSF10AO00220 468 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 PLCG1P19174 1290 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 NDUFV1P49821 464 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 CACNB1Q02641 598 aaPredicted RBP23.31■■□□□ 1.32
LIME1-204ENST00000476183 DSC1Q08554 894 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 DDX53Q86TM3 631 aaKnown RBP23.31■■□□□ 1.32
LIME1-204ENST00000476183 VPS52Q8N1B4 723 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 EPSTI1Q96J88 318 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 MSLNLQ96KJ4 702 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 CLIC6Q96NY7 704 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 ZBP1Q9H171 429 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 ZSCAN16Q9H4T2 348 aaPredicted RBP23.31■■□□□ 1.32
LIME1-204ENST00000476183 KMT5AQ9NQR1 393 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 SNTG2Q9NY99 539 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 BARX2Q9UMQ3 279 aaPredicted RBP23.31■■□□□ 1.32
LIME1-204ENST00000476183 PHLPP2Q6ZVD8 1323 aa23.31■■□□□ 1.32
LIME1-204ENST00000476183 CARNS1A5YM72 827 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 C2orf71A6NGG8 1288 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 NRP1O14786 923 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 SLC16A4O15374 487 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 ALDH2P05091 517 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 ATF7IP2Q5U623 682 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 MRPL43Q8N983 215 aaKnown RBP23.3■■□□□ 1.32
LIME1-204ENST00000476183 AUTS2Q8WXX7 1259 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 CDCA3Q99618 268 aaPredicted RBP23.3■■□□□ 1.32
LIME1-204ENST00000476183 CCSER1Q9C0I3 900 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 CXCL16Q9H2A7 254 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 TMEM134Q9H6X4 195 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 C17orf75Q9HAS0 396 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 MARCH5Q9NX47 278 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 KCND2Q9NZV8 630 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 FAN1Q9Y2M0 1017 aa23.3■■□□□ 1.32
LIME1-204ENST00000476183 SRPRBQ9Y5M8 271 aaKnown RBP23.3■■□□□ 1.32
LIME1-204ENST00000476183 ZMYM2Q9UBW7 1377 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 PLS3P13797 630 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 KCNC3Q14003 757 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 DHX8Q14562 1220 aaKnown RBP23.29■■□□□ 1.32
LIME1-204ENST00000476183 MCM6Q14566 821 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 SMC1AQ14683 1233 aaKnown RBP23.29■■□□□ 1.32
LIME1-204ENST00000476183 PUS10Q3MIT2 529 aaKnown RBP23.29■■□□□ 1.32
LIME1-204ENST00000476183 SPIRE2Q8WWL2 714 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 RAD54LQ92698 747 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 ADPGKQ9BRR6 497 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 NTPCRQ9BSD7 190 aaKnown RBP23.29■■□□□ 1.32
LIME1-204ENST00000476183 PRG3Q9Y2Y8 225 aaPredicted RBP23.29■■□□□ 1.32
LIME1-204ENST00000476183 MYH15Q9Y2K3 1946 aa23.29■■□□□ 1.32
LIME1-204ENST00000476183 F8W810 466 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 RECQL4O94761 1208 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 OR1G1P47890 313 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 GPBP1Q86WP2 473 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 RASSF8Q8NHQ8 419 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 ACO2Q99798 780 aaKnown RBP23.28■■□□□ 1.32
LIME1-204ENST00000476183 CD207Q9UJ71 328 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 TNFSF13BQ9Y275 285 aa23.28■■□□□ 1.32
LIME1-204ENST00000476183 RBM19Q9Y4C8 960 aaKnown RBP23.28■■□□□ 1.32
LIME1-204ENST00000476183 MBTPS2O43462 519 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 CXCL14O95715 111 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 CTSAP10619 480 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 SLC39A14Q15043 492 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 DCAF4L1Q3SXM0 396 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 FAM178BQ8IXR5 827 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 TMEM161BQ8NDZ6 487 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 REEP2Q9BRK0 252 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 TARS2Q9BW92 718 aaKnown RBP23.27■■□□□ 1.32
LIME1-204ENST00000476183 PTPRHQ9HD43 1115 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 CD320Q9NPF0 282 aa23.27■■□□□ 1.32
LIME1-204ENST00000476183 MORC2Q9Y6X9 1032 aaPredicted RBP23.27■■□□□ 1.32
LIME1-204ENST00000476183 PTGESO14684 152 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
LIME1-204ENST00000476183 GRIK3Q13003 919 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 COASYQ13057 564 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 SMAD4Q13485 552 aaKnown RBP23.26■■□□□ 1.31
LIME1-204ENST00000476183 FOXD4L5Q5VV16 416 aaPredicted RBP23.26■■□□□ 1.31
LIME1-204ENST00000476183 LLGL2Q6P1M3 1020 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 SPRYD3Q8NCJ5 442 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 FOXD4L4Q8WXT5 416 aaPredicted RBP23.26■■□□□ 1.31
LIME1-204ENST00000476183 RPS6KC1Q96S38 1066 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 MRPL4Q9BYD3 311 aaKnown RBP23.26■■□□□ 1.31
LIME1-204ENST00000476183 CACNG4Q9UBN1 327 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 GDAQ9Y2T3 454 aa23.26■■□□□ 1.31
LIME1-204ENST00000476183 TRIP11Q15643 1979 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.25■■□□□ 1.31
LIME1-204ENST00000476183 ABLIM1O14639 778 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 CLASP2O75122 1294 aaKnown RBP23.25■■□□□ 1.31
LIME1-204ENST00000476183 EFEMP2O95967 443 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 HSP90AA1P07900 732 aaKnown RBP23.25■■□□□ 1.31
LIME1-204ENST00000476183 MAPTP10636 758 aaKnown RBP23.25■■□□□ 1.31
LIME1-204ENST00000476183 CA8P35219 290 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 GIT2Q14161 759 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 SMAD2Q15796 467 aaKnown RBP23.25■■□□□ 1.31
LIME1-204ENST00000476183 TMEM184AQ6ZMB5 413 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 TAS1R1Q7RTX1 841 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 CEP120Q8N960 986 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 SMRP1Q8NCR6 262 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 LARP4BQ92615 738 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms