RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 NPTXRO95502 500 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 POMCP01189 267 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 PRKCBP05771 671 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 CDC25AP30304 524 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 MLH1P40692 756 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 DMP1Q13316 513 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 ZRSR1Q15695 479 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 DUSP6Q16828 381 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 SUGP1Q8IWZ8 645 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 IGSF21Q96ID5 467 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 AK8Q96MA6 479 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 DRC1Q96MC2 740 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 APOL6Q9BWW8 343 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 FZD8Q9H461 694 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 DNAJB4Q9UDY4 337 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 GIT1Q9Y2X7 761 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 HES2Q9Y543 173 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 PHLPP2Q6ZVD8 1323 aa12.57□□□□□ -0.4
NUDCD3-206ENST00000475952 ARL5CA6NH57 179 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 K7ELQ4 463 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 ACKR2O00590 384 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 PER2O15055 1255 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 INPPL1O15357 1258 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 SLC26A4O43511 780 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 NR1I2O75469 434 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 GLP2RO95838 553 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 GALTP07902 379 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 LIG1P18858 919 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 SLC11A1P49279 550 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 EFNA5P52803 228 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 ZXDAP98168 799 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 COASYQ13057 564 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 GIT2Q14161 759 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 HYIQ5T013 277 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 DDX53Q86TM3 631 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 TMEM173Q86WV6 379 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 CDR2LQ86X02 465 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 MSLNLQ96KJ4 702 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 GAD1Q99259 594 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 TIPINQ9BVW5 301 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 ZBP1Q9H171 429 aa12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-206ENST00000475952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 C2orf71A6NGG8 1288 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 HIDE1A8MVS5 230 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 LOC730098B7Z3J9 87 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 DDHD2O94830 711 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 ALDH2P05091 517 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 CTSAP10619 480 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 SCNN1GP51170 649 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 PEX3P56589 373 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 GRIK3Q13003 919 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 DCAF4L1Q3SXM0 396 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 RINT1Q6NUQ1 792 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 TMEM87AQ8NBN3 555 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 SMRP1Q8NCR6 262 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 RASSF8Q8NHQ8 419 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 CALML4Q96GE6 196 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 KIFC3Q9BVG8 833 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 RUSC1Q9BVN2 902 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 PDZD7Q9H5P4 517 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 C17orf75Q9HAS0 396 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 KCND2Q9NZV8 630 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 CLEC1BQ9P126 229 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
NUDCD3-206ENST00000475952 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 K7ERI5 159 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 B4GALT3O60512 393 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 HIP1RO75146 1068 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 AKAP5P24588 427 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 LONP1P36776 959 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 UBA7P41226 1012 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 OR1G1P47890 313 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 TMEM184AQ6ZMB5 413 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 KCNK18Q7Z418 384 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 CABP7Q86V35 215 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 MRPL43Q8N983 215 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms