RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NVLO15381 856 aaKnown RBP19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 CBX6O95503 412 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 MOGSQ13724 837 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 FOXB2Q5VYV0 432 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 RHBDF2Q6PJF5 856 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 SLC51AQ86UW1 340 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 SLC13A5Q86YT5 568 aaPredicted RBP19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 CEP95Q96GE4 821 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 GORASP1Q9BQQ3 440 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 REEP2Q9BRK0 252 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 DCLRE1BQ9H816 532 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 MTUS1Q9ULD2 1270 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 FRMPD4Q14CM0 1322 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 SIGLEC16A6NMB1 481 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 MAPK13O15264 365 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 COMTP21964 271 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 RPL13P26373 211 aaKnown RBP19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 STAT3P40763 770 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 WDR4P57081 412 aaKnown RBP19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 LMNB2Q03252 620 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 KCNA1Q09470 495 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 DNAJC3Q13217 504 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 TMEM63BQ5T3F8 832 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 CCDC24Q8N4L8 307 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 SH3TC2Q8TF17 1288 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 SPOCK2Q92563 424 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 EZH1Q92800 747 aaPredicted RBP19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 BORCS6Q96GS4 357 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 WHRNQ9P202 907 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 CHORDC1Q9UHD1 332 aaPredicted RBP19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 ARFGEF1Q9Y6D6 1849 aa19.92■□□□□ 0.78
ECHDC1-214ENST00000474289 POLE2P56282 527 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 SESN3P58005 492 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 IL9RQ01113 521 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 GRIK5Q16478 980 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 PAIP2Q9BPZ3 127 aaKnown RBP19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 LGALS13Q9UHV8 139 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 PHTF1Q9UMS5 762 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 NAALADL1Q9UQQ1 740 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 TCEA3O75764 348 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 POTEJP0CG39 1038 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 CHRNB2P17787 502 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 SLCO1B3Q9NPD5 702 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 LRCH1Q9Y2L9 728 aa19.91■□□□□ 0.78
ECHDC1-214ENST00000474289 NAV1Q8NEY1 1877 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 MROH7Q68CQ1 1323 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 THAP12O43422 761 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 RPS8P62241 208 aaKnown RBP19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 PSMC6P62333 389 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 KRT17Q04695 432 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 MESDQ14696 234 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 MAPKAPK5Q8IW41 473 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 NEDD1Q8NHV4 660 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 B4GALNT2Q8NHY0 566 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 LRRC8CQ8TDW0 803 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 BCAS3Q9H6U6 928 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 DNAJC18Q9H819 358 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 SCOCQ9UIL1 159 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 DCTN3O75935 186 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 CDK8P49336 464 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 CLK2P49760 499 aaKnown RBP19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 RCN2Q14257 317 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 ARMC3Q5W041 872 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 CPNE8Q86YQ8 564 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 C12orf50Q8NA57 414 aaPredicted RBP19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 FBXO41Q8TF61 875 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 IKZF4Q9H2S9 585 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 STOML1Q9UBI4 398 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 ASIC3Q9UHC3 531 aa19.9■□□□□ 0.78
ECHDC1-214ENST00000474289 SPATA31A1Q5TZJ5 1347 aa19.89■□□□□ 0.78
ECHDC1-214ENST00000474289 RSPH10B2B2RC85 870 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 SMAPO00193 183 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 TRAFD1O14545 582 aaPredicted RBP19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 CDH16O75309 829 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 LRRN2O75325 713 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 RSPH10BP0C881 870 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 RXRBP28702 533 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 VHLP40337 213 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 FMO5P49326 533 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 RASSF2P50749 326 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 LLGL1Q15334 1064 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 ARHGAP44Q17R89 818 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 KHDC1Q4VXA5 237 aaKnown RBP19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 RNF207Q6ZRF8 634 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 SLC20A1Q8WUM9 679 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 CD101Q93033 1021 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 TRAPPC9Q96Q05 1148 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 PCMTD2Q9NV79 361 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 NINJ2Q9NZG7 142 aa19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 RPL26L1Q9UNX3 145 aaKnown RBP19.89■□□□□ 0.77
ECHDC1-214ENST00000474289 FAM47DPA6NHR8 397 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 MAGEB2O15479 319 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 FTLP02792 175 aaPredicted RBP19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 PYGLP06737 847 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 CUL3Q13618 768 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 BMT2Q1RMZ1 405 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 FGD4Q96M96 766 aa19.88■□□□□ 0.77
ECHDC1-214ENST00000474289 LRRC19Q9H756 370 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms