RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 FBXL18Q96ME1 805 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 KREMEN1Q96MU8 473 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 TCHPQ9BT92 498 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 NUCKS1Q9H1E3 243 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 SEPT11Q9NVA2 429 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 ERAP1Q9NZ08 941 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 CGNQ9P2M7 1197 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 SIP14410 1827 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 ADGRA2Q96PE1 1338 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 INO80B-WBP1J3KQ70 363 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 DDX3XO00571 662 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLK1-210ENST00000473565 ZNF185O15231 689 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 DYNC1LI2O43237 492 aaPredicted RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 MSCO60682 206 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 CLSTN1O94985 981 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 TUBB4AP04350 444 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 TNNI1P19237 187 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 CTGFP29279 349 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 MAPK4P31152 587 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 STAT1P42224 750 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 TMEM62Q0P6H9 643 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 LAMC2Q13753 1193 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 KIAA0753Q2KHM9 967 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 IER5Q5VY09 327 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 SPOPLQ6IQ16 392 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 ABRAQ8N0Z2 381 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 U2AF1L4Q8WU68 220 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 ERO1AQ96HE7 468 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 MFSD14AQ96MC6 490 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 C16orf70Q9BSU1 422 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 STK33Q9BYT3 514 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 INO80BQ9C086 356 aaPredicted RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 ABT1Q9ULW3 272 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 KAT6AQ92794 2004 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 IGKV6-21A0A0C4DH24 114 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 ZNF233A6NK53 670 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 EXTL3O43909 919 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 C22orf31O95567 290 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 PRKCBP05771 671 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 GARTP22102 1010 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 CRHR2Q13324 411 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TEX35Q5T0J7 233 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TAF3Q5VWG9 929 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 EEF1DP3Q658K8 133 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 IFNL1Q8IU54 200 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 ARHGAP39Q9C0H5 1083 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TAS2R14Q9NYV8 317 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 RBAKQ9NYW8 714 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 GINS2Q9Y248 185 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 A0A0B4J269 797 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 RBM47A0AV96 593 aaKnown RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 H3BRB1 525 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 HBP1O60381 514 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TADA3O75528 432 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 MMP3P08254 477 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 FGFR4P22455 802 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 CXCR5P32302 372 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 AMPD2Q01433 879 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 BIRC3Q13489 604 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TMEM132AQ24JP5 1023 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 MORN1Q5T089 497 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TDRD10Q5VZ19 366 aaKnown RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 OLFML2BQ68BL8 750 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 KRT39Q6A163 491 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 OR5B17Q8NGF7 314 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 PPTC7Q8NI37 304 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 CCDC113Q9H0I3 377 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TUT1Q9H6E5 874 aaKnown RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 TMEM8AQ9HCN3 771 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 RNF216Q9NWF9 866 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 SMARCAL1Q9NZC9 954 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 EHD2Q9NZN4 543 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 CHORDC1Q9UHD1 332 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 CDC23Q9UJX2 597 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 NAGPAQ9UK23 515 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 FBXL5Q9UKA1 691 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 PACSIN2Q9UNF0 486 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 AKT3Q9Y243 479 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 MGAMO43451 1857 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TRIP12Q14669 1992 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 UMODL1Q5DID0 1318 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 A0A087WZ62 844 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 MANSC4A6NHS7 340 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 SLC15A5A6NIM6 579 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 H0YCG3 227 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 CYP26A1O43174 497 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 FTCDO95954 541 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 FERP16591 822 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 PRKCIP41743 596 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 SNRPFP62306 86 aaKnown RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 BEX3Q00994 111 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TNFAIP2Q03169 654 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 CETN1Q12798 172 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 MAP2K5Q13163 448 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 DUSP28Q4G0W2 176 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 ALKBH5Q6P6C2 394 aaKnown RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 ZNF467Q7Z7K2 595 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 TMEM192Q8IY95 271 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 THNSL1Q8IYQ7 743 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 TMEM174Q8WUU8 243 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms