RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LRRC55Q6ZSA7 311 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 KSR1Q8IVT5 923 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 NPAS3Q8IXF0 933 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 POF1BQ8WVV4 589 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 CLIC6Q96NY7 704 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 MAP7D2Q96T17 732 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 CSRNP2Q9H175 543 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 IGFLR1Q9H665 355 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 CWH43Q9H720 699 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 C1orf112Q9NSG2 853 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 TYW1Q9NV66 732 aaKnown RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 CFAP45Q9UL16 551 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 ATP6V1DQ9Y5K8 247 aa10.15□□□□□ -0.78
SMC4-213ENST00000472282 SRPRBQ9Y5M8 271 aaKnown RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 MORC2Q9Y6X9 1032 aaPredicted RBP10.15□□□□□ -0.78
SMC4-213ENST00000472282 A0A087WWV3 80 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 A0A087WZ62 844 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 PPP6R2O75170 966 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 DARSP14868 501 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 ATF7P17544 494 aaPredicted RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 EIF4BP23588 611 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 PBX3P40426 434 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 NPEPPSP55786 919 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 KRT85P78386 507 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 RBM10P98175 930 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 XKR9Q5GH70 373 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 CABP7Q86V35 215 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 PIGOQ8TEQ8 1089 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 CEP170P1Q96L14 293 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 AK8Q96MA6 479 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 CCDC43Q96MW1 224 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 IPO9Q96P70 1041 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 CASD1Q96PB1 797 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 FDXACB1Q9BRP7 624 aaPredicted RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 C11orf16Q9NQ32 467 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 CYP26B1Q9NR63 512 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 DDX19AQ9NUU7 478 aaKnown RBP10.14□□□□□ -0.79
SMC4-213ENST00000472282 TMEM161AQ9NX61 479 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 KIAA1024Q9UPX6 916 aa10.14□□□□□ -0.79
SMC4-213ENST00000472282 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 MAFO75444 373 aaPredicted RBP10.13□□□□□ -0.79
SMC4-213ENST00000472282 GLP2RO95838 553 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 MUTP22033 750 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 TMOD1P28289 359 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 UBA7P41226 1012 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 ERVFC1P60507 584 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 ADAM15Q13444 863 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 NAALADL2Q58DX5 795 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 CLLU1OSQ5K130 101 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 ODR4Q5SWX8 454 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 SPOUT1Q5T280 376 aaKnown RBP10.13□□□□□ -0.79
SMC4-213ENST00000472282 USP49Q70CQ1 688 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 OTUD6AQ7L8S5 288 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 KCNK18Q7Z418 384 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 TRIM46Q7Z4K8 759 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 RBM23Q86U06 439 aaKnown RBP10.13□□□□□ -0.79
SMC4-213ENST00000472282 ECHDC2Q86YB7 292 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 COLGALT1Q8NBJ5 622 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 KCNG4Q8TDN1 519 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
SMC4-213ENST00000472282 CDK5RAP3Q96JB5 506 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 SPATA32Q96LK8 384 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 PNMA5Q96PV4 448 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 NACC1Q96RE7 527 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 PLIN2Q99541 437 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 ELAC1Q9H777 363 aaKnown RBP10.13□□□□□ -0.79
SMC4-213ENST00000472282 ATP6V0A4Q9HBG4 840 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 ANKEF1Q9NU02 776 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 CHMP5Q9NZZ3 219 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 CLEC1BQ9P126 229 aa10.13□□□□□ -0.79
SMC4-213ENST00000472282 FAM86C2PA6NEL3 165 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 MEIS3P2A8K0S8 358 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 E9PMD0 336 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 PER2O15055 1255 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 MBTPS2O43462 519 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 USO1O60763 962 aaKnown RBP10.12□□□□□ -0.79
SMC4-213ENST00000472282 CUTAO60888 179 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 FGF18O76093 207 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 PLCG1P19174 1290 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 ME1P48163 572 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 NRIP1P48552 1158 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 RARRES1P49788 294 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 POLGP54098 1239 aaPredicted RBP10.12□□□□□ -0.79
SMC4-213ENST00000472282 ZP2Q05996 745 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 EMC2Q15006 297 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 KARSQ15046 597 aaKnown RBP10.12□□□□□ -0.79
SMC4-213ENST00000472282 LONRF3Q496Y0 759 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 TMEM119Q4V9L6 283 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 HYIQ5T013 277 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 LYPD8Q6UX82 237 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 RHPN2Q8IUC4 686 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 GJD3Q8N144 294 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 VN1R2Q8NFZ6 395 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 IRF7Q92985 503 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 CALML4Q96GE6 196 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms