RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RNASET2O00584 256 aaKnown RBP6.68□□□□□ -1.34
CD46-213ENST00000471987 B3GALT2O43825 422 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 ZEB2O60315 1214 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 TMEM127O75204 238 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 MGAT1P26572 445 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 LGALS4P56470 323 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 CT83Q5H943 113 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 ABHD15Q6UXT9 468 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 PDZD4Q76G19 769 aaPredicted RBP6.68□□□□□ -1.34
CD46-213ENST00000471987 PRDM12Q9H4Q4 367 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 IFT22Q9H7X7 185 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 ULK1O75385 1050 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 ITGA10O75578 1167 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 LPLP06858 475 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 PROZP22891 400 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 CTSSP25774 331 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 ZFP36P26651 326 aaKnown RBP6.67□□□□□ -1.34
CD46-213ENST00000471987 PTTG1IPP53801 180 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 SESN3P58005 492 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 TAP1Q03518 808 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 UGT8Q16880 541 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 LILRA3Q8N6C8 439 aaPredicted RBP6.67□□□□□ -1.34
CD46-213ENST00000471987 ACAP3Q96P50 834 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 TTC1Q99614 292 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 GPRC5DQ9NZD1 345 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 CHST2Q9Y4C5 530 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 ZMYM3Q14202 1370 aa6.67□□□□□ -1.34
CD46-213ENST00000471987 CENPVL1A0A0U1RR11 272 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 TBKBP1A7MCY6 615 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 LEFTY2O00292 366 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 BMP5P22003 454 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 FAM189BP81408 668 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 NHLH2Q02577 135 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 PDCD1Q15116 288 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
CD46-213ENST00000471987 EFCAB12Q6NXP0 572 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 DDX46Q7L014 1031 aaKnown RBP6.66□□□□□ -1.34
CD46-213ENST00000471987 NOP9Q86U38 636 aaKnown RBP6.66□□□□□ -1.34
CD46-213ENST00000471987 PLXDC1Q8IUK5 500 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 OR10H5Q8NGA6 315 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 MDM1Q8TC05 714 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 ZNF480Q8WV37 535 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 CYP4F11Q9HBI6 524 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 AKIP1Q9NQ31 210 aa6.66□□□□□ -1.34
CD46-213ENST00000471987 TOPORSQ9NS56 1045 aaPredicted RBP6.66□□□□□ -1.34
CD46-213ENST00000471987 GRID2IPA4D2P6 1211 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 TMEM200CA6NKL6 621 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 NEMP1O14524 444 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 PHF2O75151 1096 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 NCR1O76036 304 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 RBP3P10745 1247 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 ZSCAN20P17040 1043 aaPredicted RBP6.65□□□□□ -1.34
CD46-213ENST00000471987 CRHR1P34998 444 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 ADRA1BP35368 520 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 ANKS6Q68DC2 871 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 HDGFL2Q7Z4V5 671 aaPredicted RBP6.65□□□□□ -1.34
CD46-213ENST00000471987 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 EAF2Q96CJ1 260 aaPredicted RBP6.65□□□□□ -1.34
CD46-213ENST00000471987 RAX2Q96IS3 184 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 TOR3AQ9H497 397 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 POGKQ9P215 609 aa6.65□□□□□ -1.34
CD46-213ENST00000471987 RPTORQ8N122 1335 aa6.65□□□□□ -1.35
CD46-213ENST00000471987 LMNAP02545 664 aaKnown RBP6.64□□□□□ -1.35
CD46-213ENST00000471987 SPATA31D3P0C874 917 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 ENPP1P22413 925 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 GYS2P54840 703 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 RNASE9P60153 205 aaKnown RBP6.64□□□□□ -1.35
CD46-213ENST00000471987 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.64□□□□□ -1.35
CD46-213ENST00000471987 BMT2Q1RMZ1 405 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 SPATA31D4Q6ZUB0 917 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 RNF180Q86T96 592 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 SYT12Q8IV01 421 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 ARHGEF19Q8IW93 802 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 GPR150Q8NGU9 434 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 ZFP28Q8NHY6 868 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 TFAP2CQ92754 450 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 SERHL2Q9H4I8 314 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 APOBEC2Q9Y235 224 aaKnown RBP6.64□□□□□ -1.35
CD46-213ENST00000471987 COL4A3Q01955 1670 aa6.64□□□□□ -1.35
CD46-213ENST00000471987 LPXNO60711 386 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 NDUFA10O95299 355 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 BMPR1AP36894 532 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 FLT3LGP49771 235 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 CSRP2Q16527 193 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 BEAN1Q3B7T3 259 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 PRAMEF14Q5SWL7 426 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 HECTD2Q5U5R9 776 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 BTNL9Q6UXG8 535 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 DPP7Q9UHL4 492 aa6.63□□□□□ -1.35
CD46-213ENST00000471987 ZEB1P37275 1124 aaPredicted RBP6.62□□□□□ -1.35
CD46-213ENST00000471987 ID4P47928 161 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 USP14P54578 494 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 STRN3Q13033 797 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 MST1LQ2TV78 715 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 GJC2Q5T442 439 aaPredicted RBP6.62□□□□□ -1.35
CD46-213ENST00000471987 THNSL2Q86YJ6 484 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 BEND2Q8NDZ0 799 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 CEP95Q96GE4 821 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 WDR11Q9BZH6 1224 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms