RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 LENG9Q96B70 501 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 PRR5-ARHGAP8B1AHC4 643 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 MUM1Q2TAK8 710 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 MST1LQ2TV78 715 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 LILRA3Q8N6C8 439 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-202ENST00000471307 FATE1Q969F0 183 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 DCLRE1CQ96SD1 692 aaKnown RBP7.66□□□□□ -1.18
CCDC39-202ENST00000471307 PRRX2Q99811 253 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 CPEB1Q9BZB8 566 aaKnown RBP7.66□□□□□ -1.18
CCDC39-202ENST00000471307 SLC2A4RGQ9NR83 387 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 GPRC5BQ9NZH0 403 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 EDARQ9UNE0 448 aa7.66□□□□□ -1.18
CCDC39-202ENST00000471307 MGAT1P26572 445 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 INHBCP55103 352 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 KCNK18Q7Z418 384 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 ULK2Q8IYT8 1036 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 SYNE4Q8N205 404 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 GPR156Q8NFN8 814 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 TSPEARQ8WU66 669 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 NEU4Q8WWR8 484 aaPredicted RBP7.65□□□□□ -1.18
CCDC39-202ENST00000471307 CLIP3Q96DZ5 547 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 AHCYL2Q96HN2 611 aaKnown RBP7.65□□□□□ -1.18
CCDC39-202ENST00000471307 NDC1Q9BTX1 674 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 WDR33Q9C0J8 1336 aaKnown RBP7.65□□□□□ -1.18
CCDC39-202ENST00000471307 FZD1Q9UP38 647 aa7.65□□□□□ -1.18
CCDC39-202ENST00000471307 K7ESF4 209 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 FAM20BO75063 409 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 FLT3LGP49771 235 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 ADRM1Q16186 407 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 RHOUQ7L0Q8 258 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 RIN2Q8WYP3 895 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-202ENST00000471307 LARP4BQ92615 738 aaKnown RBP7.64□□□□□ -1.19
CCDC39-202ENST00000471307 KCNH6Q9H252 994 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 SLITRK6Q9H5Y7 841 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 GREM2Q9H772 168 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 NRDE2Q9H7Z3 1164 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 IFT122Q9HBG6 1241 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 C14orf119Q9NWQ9 140 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 SCOCQ9UIL1 159 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 SORCS3Q9UPU3 1222 aa7.64□□□□□ -1.19
CCDC39-202ENST00000471307 TBKBP1A7MCY6 615 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 DIRC3C9JPN6 131 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 SLC5A3P53794 718 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 SCAND1P57086 179 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 CDK17Q00537 523 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 FAM193BQ96PV7 902 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-202ENST00000471307 SLC46A2Q9BY10 475 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 BCO1Q9HAY6 547 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 VTA1Q9NP79 307 aa7.63□□□□□ -1.19
CCDC39-202ENST00000471307 EIF2B4Q9UI10 523 aaKnown RBP7.63□□□□□ -1.19
CCDC39-202ENST00000471307 ZMYM3Q14202 1370 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 PJA2O43164 708 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 AKR1B10O60218 316 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 SCAF4O95104 1147 aaKnown RBP7.62□□□□□ -1.19
CCDC39-202ENST00000471307 ITGB1P05556 798 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 MUM1L1Q5H9M0 696 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 FAM47AQ5JRC9 791 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 MRGPREQ86SM8 312 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 XYLT1Q86Y38 959 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 CMIPQ8IY22 773 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 OR7D4Q8NG98 312 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 CPT1CQ8TCG5 803 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 TGFBRAP1Q8WUH2 860 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 ACE2Q9BYF1 805 aaPredicted RBP7.62□□□□□ -1.19
CCDC39-202ENST00000471307 QRSL1Q9H0R6 528 aaKnown RBP7.62□□□□□ -1.19
CCDC39-202ENST00000471307 RBM12Q9NTZ6 932 aaKnown RBP7.62□□□□□ -1.19
CCDC39-202ENST00000471307 MCM8Q9UJA3 840 aa7.62□□□□□ -1.19
CCDC39-202ENST00000471307 GAGE12BA1L429 117 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 GAGE12HA6NDE8 117 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 TMEM191CA6NGB0 347 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 PRKD3O94806 890 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 RBP3P10745 1247 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 ECHS1P30084 290 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 GPR3P46089 330 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 ERVK-21P61565 698 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 BMT2Q1RMZ1 405 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 PRAMEF14Q5SWL7 426 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 EFCAB12Q6NXP0 572 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 LRRC55Q6ZSA7 311 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 LHFPL2Q6ZUX7 228 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 LDLRAD3Q86YD5 345 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 MDM1Q8TC05 714 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 CHFRQ96EP1 664 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 SPON1Q9HCB6 807 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 ZBTB21Q9ULJ3 1066 aa7.61□□□□□ -1.19
CCDC39-202ENST00000471307 WASHC2AQ641Q2 1341 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 SUV39H1O43463 412 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 RPS6KA4O75676 772 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 MALLQ13021 153 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 SP140Q13342 867 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 ZNF572Q7Z3I7 529 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-202ENST00000471307 ATL2Q8NHH9 583 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 ZFP28Q8NHY6 868 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 SSH1Q8WYL5 1049 aa7.6□□□□□ -1.19
CCDC39-202ENST00000471307 PHLDB1Q86UU1 1377 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 POU3F3P20264 500 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-202ENST00000471307 NR4A1P22736 598 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 APOBEC3AP31941 199 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-202ENST00000471307 MTNR1BP49286 362 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms