RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 INPP4AQ96PE3 977 aaPredicted RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 KRT12Q99456 494 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.022e-9■■■■■ 161.6
SMC4-212ENST00000470240 PLVAPQ9BX97 442 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 KIAA1683Q9H0B3 1180 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 RAB17Q9H0T7 212 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 AGO4Q9HCK5 861 aaKnown RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 EPB41L5Q9HCM4 733 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 SIX2Q9NPC8 291 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 ZNF277Q9NRM2 450 aaPredicted RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 DMAC2Q9NW81 257 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 RASAL2Q9UJF2 1139 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 MIF4GDA9UHW6 222 aaKnown RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 ERVH48-1M5A8F1 160 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 KRIT1O00522 736 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 RPS6KA5O75582 802 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 TAL1P17542 331 aaPredicted RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 SCP2P22307 547 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 CCND2P30279 289 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 GBP1P32455 592 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 MFAP3P55082 362 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 JAG1P78504 1218 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 GHRHRQ02643 423 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 DMP1Q13316 513 aaPredicted RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 RRP1BQ14684 758 aaKnown RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 TKFCQ3LXA3 575 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 ZC2HC1CQ53FD0 456 aaPredicted RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 ARHGEF16Q5VV41 709 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 KLHL7Q8IXQ5 586 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 GSPT2Q8IYD1 628 aaKnown RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 CPXCR1Q8N123 301 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 MREGQ8N565 214 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 ARFGAP2Q8N6H7 521 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 UBL4BQ8N7F7 174 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 TMEM174Q8WUU8 243 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 IFT81Q8WYA0 676 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 BORCS6Q96GS4 357 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 CDHR1Q96JP9 859 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 RUNDC3BQ96NL0 473 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 PACSIN1Q9BY11 444 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 MAF1Q9H063 256 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 ST6GALNAC4Q9H4F1 302 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 C17orf75Q9HAS0 396 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 MYOZ2Q9NPC6 264 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 GDF3Q9NR23 364 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 TMPRSS4Q9NRS4 437 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 FAM114A2Q9NRY5 505 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 KCNH7Q9NS40 1196 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 ANKEF1Q9NU02 776 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 SALL4Q9UJQ4 1053 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 UTP11Q9Y3A2 253 aaKnown RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 NOC2LQ9Y3T9 749 aaKnown RBP8.64□□□□□ -1.03
SMC4-212ENST00000470240 UBIAD1Q9Y5Z9 338 aa8.64□□□□□ -1.03
SMC4-212ENST00000470240 SYNGAP1Q96PV0 1343 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 ANKRD62A6NC57 917 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 MAFGO15525 162 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 TRIM49P0CI25 452 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 TRIM49CP0CI26 452 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 MYCLP12524 364 aaPredicted RBP8.63□□□□□ -1.03
SMC4-212ENST00000470240 YWHABP31946 246 aaKnown RBP8.63□□□□□ -1.03
SMC4-212ENST00000470240 BAG6P46379 1132 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 RARRES1P49788 294 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 MXI1P50539 228 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 GALCP54803 685 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 MAP3K10Q02779 954 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 RASA3Q14644 834 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 PLS1Q14651 629 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 KIF22Q14807 665 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 ARHGAP44Q17R89 818 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 KIAA1755Q5JYT7 1200 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 ZNF746Q6NUN9 644 aaPredicted RBP8.63□□□□□ -1.03
SMC4-212ENST00000470240 B3GNT9Q6UX72 402 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 RNF207Q6ZRF8 634 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 Q6ZVU0 165 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 C4orf19Q8IY42 314 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 LRRC57Q8N9N7 239 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 ZNF784Q8NCA9 323 aaPredicted RBP8.63□□□□□ -1.03
SMC4-212ENST00000470240 MORC4Q8TE76 937 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 KIFAP3Q92845 792 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 MS4A14Q96JA4 679 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 GDAP1L1Q96MZ0 367 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 CEP89Q96ST8 783 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 ISCUQ9H1K1 167 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 TAF1DQ9H5J8 278 aaPredicted RBP8.63□□□□□ -1.03
SMC4-212ENST00000470240 SLC38A10Q9HBR0 1119 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 PICK1Q9NRD5 415 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 PIM2Q9P1W9 311 aa8.63□□□□□ -1.03
SMC4-212ENST00000470240 DMGDHQ9UI17 866 aaKnown RBP8.63□□□□□ -1.03
SMC4-212ENST00000470240 EMSYQ7Z589 1322 aa8.62□□□□□ -1.03
SMC4-212ENST00000470240 CCDC169A6NNP5 214 aa8.62□□□□□ -1.03
SMC4-212ENST00000470240 HMGB1P1B2RPK0 211 aaPredicted RBP8.62□□□□□ -1.03
SMC4-212ENST00000470240 DDX3XO00571 662 aaKnown RBP eCLIP8.62□□□□□ -1.034e-78■■■■■ 527.9
SMC4-212ENST00000470240 PMM2O15305 246 aa8.62□□□□□ -1.03
SMC4-212ENST00000470240 GPR37L1O60883 481 aa8.62□□□□□ -1.03
SMC4-212ENST00000470240 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms