RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 C8orf76Q96K31 380 aa19.38■□□□□ 0.69
COL7A1-208ENST00000470076 PRIMPOLQ96LW4 560 aa19.38■□□□□ 0.69
COL7A1-208ENST00000470076 POLR3CQ9BUI4 534 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-208ENST00000470076 COLEC11Q9BWP8 271 aa19.38■□□□□ 0.69
COL7A1-208ENST00000470076 PRMT7Q9NVM4 692 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-208ENST00000470076 MIOSQ9NXC5 875 aa19.38■□□□□ 0.69
COL7A1-208ENST00000470076 DPP7Q9UHL4 492 aa19.38■□□□□ 0.69
COL7A1-208ENST00000470076 MED24O75448 989 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 SEC24BO95487 1268 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 NPTXRO95502 500 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 BRD1O95696 1058 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 CCDC149Q6ZUS6 474 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 MAEAQ7L5Y9 396 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 CCDC83Q8IWF9 413 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 ZBTB8OSQ8IWT0 167 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-208ENST00000470076 FOXP1Q9H334 677 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-208ENST00000470076 GPRC5CQ9NQ84 441 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 C2orf16Q68DN1 1984 aa19.37■□□□□ 0.69
COL7A1-208ENST00000470076 TEX28O15482 410 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 OR52Z1P0C646 297 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 AKAP5P24588 427 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 RPA1P27694 616 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 AVPR2P30518 371 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 DSG1Q02413 1049 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 GRIK3Q13003 919 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 FAM187BQ17R55 369 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 KIAA0319Q5VV43 1072 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 CDCA2Q69YH5 1023 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-208ENST00000470076 OTOP3Q7RTS5 596 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 TAS1R1Q7RTX1 841 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 CDR2LQ86X02 465 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-208ENST00000470076 GSTCDQ8NEC7 633 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 CMASQ8NFW8 434 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-208ENST00000470076 C2orf40Q9H1Z8 148 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 RXFP1Q9HBX9 757 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 LIMD1Q9UGP4 676 aa19.36■□□□□ 0.69
COL7A1-208ENST00000470076 ASGR2P07307 311 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 MUTP22033 750 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 NUBP1P53384 320 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 VCPP55072 806 aaKnown RBP19.35■□□□□ 0.69
COL7A1-208ENST00000470076 HMGN5P82970 282 aaKnown RBP19.35■□□□□ 0.69
COL7A1-208ENST00000470076 POTEGQ6S5H5 508 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 CYP26C1Q6V0L0 522 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 GPR65Q8IYL9 337 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 FBXO18Q8NFZ0 1043 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 FZD8Q9H461 694 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 MAN1C1Q9NR34 630 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 CHST7Q9NS84 486 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 PARP2Q9UGN5 583 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 PLXNA3P51805 1871 aa19.35■□□□□ 0.69
COL7A1-208ENST00000470076 ARHGEF35A5YM69 484 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 GLUD1P00367 558 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 C1RP00736 705 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 PDGFBP01127 241 aaPredicted RBP19.34■□□□□ 0.69
COL7A1-208ENST00000470076 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
COL7A1-208ENST00000470076 TCF15Q12870 199 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 ZNF174Q15697 407 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 USP41Q3LFD5 358 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 HAUS3Q68CZ6 603 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 FUT10Q6P4F1 479 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 PADI6Q6TGC4 694 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 FEZF2Q8TBJ5 459 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 HDAC7Q8WUI4 952 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 ZSCAN31Q96LW9 406 aaPredicted RBP19.34■□□□□ 0.69
COL7A1-208ENST00000470076 RHOBTB2Q9BYZ6 727 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 IRF2BPLQ9H1B7 796 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL7A1-208ENST00000470076 ADAM28Q9UKQ2 775 aa19.34■□□□□ 0.69
COL7A1-208ENST00000470076 MTCL1Q9Y4B5 1905 aaKnown RBP19.33■□□□□ 0.69
COL7A1-208ENST00000470076 F8W810 466 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 N4BP3O15049 544 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 CYP11B2P19099 503 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 NAMPTP43490 491 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 TRAPPC10P48553 1259 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 GNL2Q13823 731 aaKnown RBP19.33■□□□□ 0.68
COL7A1-208ENST00000470076 MAPK6Q16659 721 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 TTC38Q5R3I4 469 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 NOSTRINQ8IVI9 506 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 SH2B1Q9NRF2 756 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-208ENST00000470076 KLK14Q9P0G3 267 aa19.33■□□□□ 0.68
COL7A1-208ENST00000470076 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-208ENST00000470076 CCDC195A0A1B0GUA6 201 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 CREMQ03060 361 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 PRPF4BQ13523 1007 aaKnown RBP19.32■□□□□ 0.68
COL7A1-208ENST00000470076 PPP2R5AQ15172 486 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 FAM184AQ8NB25 1140 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 GPR62Q9BZJ7 368 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 SMOC2Q9H3U7 446 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 PLEKHA4Q9H4M7 779 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 PDZD7Q9H5P4 517 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 FNIP2Q9P278 1114 aa19.32■□□□□ 0.68
COL7A1-208ENST00000470076 NOL7Q9UMY1 257 aaKnown RBP19.32■□□□□ 0.68
COL7A1-208ENST00000470076 ACKR2O00590 384 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 TADA2AO75478 443 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 PRKCBP05771 671 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 FXR2P51116 673 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL7A1-208ENST00000470076 TUSC3Q13454 348 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 HSP90AA2PQ14568 343 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms