RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TCHPQ9BT92 498 aa19.68■□□□□ 0.74
SMC4-211ENST00000469858 TMEM8AQ9HCN3 771 aa19.68■□□□□ 0.74
SMC4-211ENST00000469858 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
SMC4-211ENST00000469858 TFR2Q9UP52 801 aa19.68■□□□□ 0.74
SMC4-211ENST00000469858 ZNF263O14978 683 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 LRRN2O75325 713 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 TBC1D8O95759 1140 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 LDHAP00338 332 aaKnown RBP19.67■□□□□ 0.74
SMC4-211ENST00000469858 F2P00734 622 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 VTNP04004 478 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 PNMA6AP0CW24 399 aaPredicted RBP19.67■□□□□ 0.74
SMC4-211ENST00000469858 ARHGAP25P42331 645 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 PTENP60484 403 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 KRT39Q6A163 491 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 CRELD2Q6UXH1 353 aaPredicted RBP19.67■□□□□ 0.74
SMC4-211ENST00000469858 ACO2Q99798 780 aaKnown RBP19.67■□□□□ 0.74
SMC4-211ENST00000469858 AP5M1Q9H0R1 490 aa19.67■□□□□ 0.74
SMC4-211ENST00000469858 PMM2O15305 246 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 TOM1L1O75674 476 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 CPT1AP50416 773 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 KIAA0753Q2KHM9 967 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 MARCH8Q5T0T0 291 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 PHLDB3Q6NSJ2 640 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 ZBTB33Q86T24 672 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 PPP1R13LQ8WUF5 828 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 WDR24Q96S15 920 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 MINDY3Q9H8M7 445 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 SETD4Q9NVD3 440 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 RBAKQ9NYW8 714 aaPredicted RBP19.66■□□□□ 0.74
SMC4-211ENST00000469858 PCNTO95613 3336 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 A0A087WZ62 844 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 KIF5CO60282 957 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 PHKA2P46019 1235 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 FLT3LGP49771 235 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 BEX3Q00994 111 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 MBTD1Q05BQ5 628 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 GFPT1Q06210 699 aaPredicted RBP19.66■□□□□ 0.74
SMC4-211ENST00000469858 ENPEPQ07075 957 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 DRAP1Q14919 205 aaPredicted RBP19.66■□□□□ 0.74
SMC4-211ENST00000469858 PSMD6Q15008 389 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 TMEM132AQ24JP5 1023 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 ASTE1Q2TB18 679 aaPredicted RBP19.66■□□□□ 0.74
SMC4-211ENST00000469858 IRF2BP2Q7Z5L9 587 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 KAT2BQ92831 832 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 FNBP1Q96RU3 617 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 FDXACB1Q9BRP7 624 aaPredicted RBP19.66■□□□□ 0.74
SMC4-211ENST00000469858 STK33Q9BYT3 514 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 FZD8Q9H461 694 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 HAUS4Q9H6D7 363 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 IFT122Q9HBG6 1241 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.66■□□□□ 0.742e-6■■■■■ 539.2
SMC4-211ENST00000469858 TRIM10Q9UDY6 481 aa19.66■□□□□ 0.74
SMC4-211ENST00000469858 F8VZ95 297 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 ACKR2O00590 384 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 FANCGO15287 622 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 AKR1A1P14550 325 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 GTF2H1P32780 548 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 STAT1P42224 750 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 WNT7BP56706 349 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 PRPF4BQ13523 1007 aaKnown RBP19.65■□□□□ 0.74
SMC4-211ENST00000469858 HSP90AA2PQ14568 343 aaPredicted RBP19.65■□□□□ 0.74
SMC4-211ENST00000469858 LMBRD2Q68DH5 695 aaPredicted RBP19.65■□□□□ 0.74
SMC4-211ENST00000469858 ARHGEF19Q8IW93 802 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 LMBR1Q8WVP7 490 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 TRIB2Q92519 343 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 JAKMIP2Q96AA8 810 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 FAM84AQ96KN4 292 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 MAP7D2Q96T17 732 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 NFKBIZQ9BYH8 718 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 IFIH1Q9BYX4 1025 aaKnown RBP19.65■□□□□ 0.74
SMC4-211ENST00000469858 PDE11AQ9HCR9 933 aa19.65■□□□□ 0.74
SMC4-211ENST00000469858 RIOK3O14730 519 aaKnown RBP19.64■□□□□ 0.74
SMC4-211ENST00000469858 B4GALT5O43286 388 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 CSDE1O75534 798 aaKnown RBP19.64■□□□□ 0.74
SMC4-211ENST00000469858 GFPT2O94808 682 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 LCA5LO95447 670 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 MYL3P08590 195 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 SMIM10L2AP0DMW4 78 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 SMIM10L2BP0DMW5 78 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 RFX1P22670 979 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 PRKCZQ05513 592 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 ARHGAP44Q17R89 818 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 CCDC122Q5T0U0 273 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 SV2AQ7L0J3 742 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 TRPV1Q8NER1 839 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 SEMA4DQ92854 862 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.64■□□□□ 0.747e-7■■□□□ 12.7
SMC4-211ENST00000469858 UBE2TQ9NPD8 197 aaPredicted RBP19.64■□□□□ 0.74
SMC4-211ENST00000469858 GUCA1BQ9UMX6 200 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 Q9Y3F1 56 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 DAAM1Q9Y4D1 1078 aa19.64■□□□□ 0.74
SMC4-211ENST00000469858 RCCD1A6NED2 376 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 RRN3P2A6NIE6 340 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 IQCF3P0C7M6 154 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 TNNI1P19237 187 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 SOX5P35711 763 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 VAV2P52735 878 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 PTK2Q05397 1052 aa19.64■□□□□ 0.73
SMC4-211ENST00000469858 MFSD10Q14728 455 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms