RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 GCOM2Q9BZD3 368 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-204ENST00000469232 SENP6Q9GZR1 1112 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-204ENST00000469232 HAPLN2Q9GZV7 340 aa8.93□□□□□ -0.98
NPHP3-204ENST00000469232 CDHR5Q9HBB8 845 aa8.93□□□□□ -0.98
NPHP3-204ENST00000469232 STARD7Q9NQZ5 370 aa8.93□□□□□ -0.98
NPHP3-204ENST00000469232 AKT3Q9Y243 479 aa8.93□□□□□ -0.98
NPHP3-204ENST00000469232 DNAH12Q6ZR08 3092 aa8.93□□□□□ -0.98
NPHP3-204ENST00000469232 A0A1B0GTH6 734 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 A0A1B0GUA9 196 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 PMM2O15305 246 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 AKAP3O75969 853 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 CHRNA1P02708 482 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 ADRB2P07550 413 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 SRGAP2CP0DJJ0 459 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 NR2F2P24468 414 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 AXLP30530 894 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 HOXA11P31270 313 aaPredicted RBP8.92□□□□□ -0.98
NPHP3-204ENST00000469232 PBX1P40424 430 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 TPM4P67936 248 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 CLDN10P78369 228 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 PPP2R3AQ06190 1150 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 STRN3Q13033 797 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 ADAM9Q13443 819 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 HSP90AA2PQ14568 343 aaPredicted RBP8.92□□□□□ -0.98
NPHP3-204ENST00000469232 NR1I3Q14994 352 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 KRT31Q15323 416 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 SLFN12LQ6IEE8 588 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 RSPH3Q86UC2 560 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 WNT2BQ93097 391 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 MRFAP1L1Q96HT8 127 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 CBWD1Q9BRT8 395 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 TARS2Q9BW92 718 aaKnown RBP8.92□□□□□ -0.98
NPHP3-204ENST00000469232 INO80BQ9C086 356 aaPredicted RBP8.92□□□□□ -0.98
NPHP3-204ENST00000469232 MCOLN1Q9GZU1 580 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 INTS13Q9NVM9 706 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 TRPV2Q9Y5S1 764 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 MROH7Q68CQ1 1323 aa8.92□□□□□ -0.98
NPHP3-204ENST00000469232 KCNJ18B7U540 433 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 TISP43B9A030 160 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 HNRNPDLO14979 420 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 B4GALT4O60513 344 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 TSPAN1O60635 241 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 PSMC2P35998 433 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 MLLT3P42568 568 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CASP4P49662 377 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 FANCCQ00597 558 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 KCNJ12Q14500 433 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 KIZQ2M2Z5 673 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 MIIPQ5JXC2 388 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CRELD2Q6UXH1 353 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 SLC39A5Q6ZMH5 540 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 SYCP3Q8IZU3 236 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 USP38Q8NB14 1042 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 XXYLT1Q8NBI6 393 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CAGE1Q8TC20 777 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 PPP1R13LQ8WUF5 828 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 TMEM40Q8WWA1 233 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CCDC51Q96ER9 411 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CNOT6LQ96LI5 555 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 MFSD14AQ96MC6 490 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 NLRP4Q96MN2 994 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 FAM49AQ9H0Q0 323 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 METTL14Q9HCE5 456 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 KIAA1586Q9HCI6 787 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 TRMT13Q9NUP7 481 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 HSPBP1Q9NZL4 362 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 BRCA2P51587 3418 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 LGALS16A8MUM7 142 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 EXTL3O43909 919 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 ARF4P18085 180 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CDC25BP30305 580 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 ZNF75DP51815 510 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 COPB1P53618 953 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 PRPF4BQ13523 1007 aaKnown RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 ATF7IP2Q5U623 682 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 MPZL3Q6UWV2 235 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 LAPTM4BQ86VI4 370 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 NAP1L5Q96NT1 182 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-204ENST00000469232 TRPV6Q9H1D0 765 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 PDZD7Q9H5P4 517 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 AGPAT5Q9NUQ2 364 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 USP20Q9Y2K6 914 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 CDY2AQ9Y6F7 541 aa8.91□□□□□ -0.98
NPHP3-204ENST00000469232 INO80B-WBP1J3KQ70 363 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 N4BP3O15049 544 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 CLIC2O15247 247 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 OGTO15294 1046 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 B4GALT5O43286 388 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 LDHAP00338 332 aaKnown RBP8.9□□□□□ -0.99
NPHP3-204ENST00000469232 MCF2P10911 925 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 CKBP12277 381 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 LIG4P49917 911 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 PTPN5P54829 565 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 DSC3Q14574 896 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 GPNMBQ14956 572 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 MAN2A1Q16706 1144 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 KYAT1Q16773 422 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms