RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CCHCR1Q8TD31 782 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 IGDCC4Q8TDY8 1250 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 BCL7CQ8WUZ0 217 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 MYLIPQ8WY64 445 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 ARL8AQ96BM9 186 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PAWRQ96IZ0 340 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 AMNQ9BXJ7 453 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 C22orf23Q9BZE7 217 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PDGFDQ9GZP0 370 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 BTBD1Q9H0C5 482 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PNPOQ9NVS9 261 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAP3K20Q9NYL2 800 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 KCMF1Q9P0J7 381 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 RBPJLQ9UBG7 517 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 USP19O94966 1318 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 A0A087WV62 115 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PRR19A6NJB7 356 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF839A8K0R7 811 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 DDX3XO00571 662 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 APOL1O14791 398 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 TLR5O60602 858 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 IL18RAPO95256 599 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 MPIG6BO95866 241 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 AGR2O95994 175 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PARP1P09874 1014 aaKnown RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 FUT4P22083 530 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 HK3P52790 923 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SUMO3P55854 103 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SETQ01105 290 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PPP3CAQ08209 521 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 MGAT2Q10469 447 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 BLMHQ13867 455 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PLS1Q14651 629 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 NR1I3Q14994 352 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAPRE1Q15691 268 aaKnown RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 CNGA2Q16280 664 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 DGKDQ16760 1214 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 TIGD5Q53EQ6 642 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 CCDC178Q5BJE1 867 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 HIBCHQ6NVY1 386 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ETV3LQ6ZN32 361 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF574Q6ZN55 896 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SYDE1Q6ZW31 735 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SAPCD2Q86UD0 394 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 NLRX1Q86UT6 975 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZC3H18Q86VM9 953 aaKnown RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 FAM126BQ8IXS8 530 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ABI1Q8IZP0 508 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ALG3Q92685 438 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 DYDC2Q96IM9 177 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 TMX3Q96JJ7 454 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 EIF2AK1Q9BQI3 630 aaKnown RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 BTBD2Q9BX70 525 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 OR10A5Q9H207 317 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 MANSC1Q9H8J5 431 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SACM1LQ9NTJ5 587 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 ARHGAP20Q9P2F6 1191 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SWAP70Q9UH65 585 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 FEZ2Q9UHY8 353 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 DNAI1Q9UI46 699 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PADI4Q9UM07 663 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PCDHA6Q9UN73 950 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 PCDHA1Q9Y5I3 950 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 RPTORQ8N122 1335 aa4.45□□□□□ -1.7
HMGB1P25-201ENST00000468402 SRGAP3O43295 1099 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 CUTAO60888 179 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ENDOD1O94919 500 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ARIH2O95376 493 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 HSP90AA1P07900 732 aaKnown RBP4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 SPINK2P20155 84 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ECHS1P30084 290 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 CDC42EP1Q00587 391 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 FMO1Q01740 532 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 SKIDA1Q1XH10 827 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 WDR72Q3MJ13 1102 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ARL13BQ3SXY8 428 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 KHDC1LQ5JSQ8 128 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ADGRF1Q5T601 910 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 PHF19Q5T6S3 580 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 KLHDC7AQ5VTJ3 777 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 JAKMIP3Q5VZ66 844 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 DPP8Q6V1X1 898 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 OTOP2Q7RTS6 562 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 BMP8AQ7Z5Y6 402 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 SPRED2Q7Z698 418 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ANKRD18AQ8IVF6 992 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 LILRA2Q8N149 483 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 IL31RAQ8NI17 732 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 NSUN6Q8TEA1 469 aaKnown RBP4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF566Q969W8 418 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 MPP4Q96JB8 637 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 FAM167AQ96KS9 214 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 TACO1Q9BSH4 297 aaKnown RBP4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 UNKQ9C0B0 810 aaKnown RBP4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 PITHD1Q9GZP4 211 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ATP6V0A4Q9HBG4 840 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 EPB41L4AQ9HCS5 686 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms