RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PRG3Q9Y2Y8 225 aaPredicted RBP12.72□□□□□ -0.37
CDHR3-205ENST00000468143 PLXNA4Q9HCM2 1894 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 C2orf71A6NGG8 1288 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 F8W810 466 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 PLCG1P19174 1290 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 GUCY2CP25092 1073 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 DMP1Q13316 513 aaPredicted RBP12.71□□□□□ -0.37
CDHR3-205ENST00000468143 MCM6Q14566 821 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
CDHR3-205ENST00000468143 ATF7IP2Q5U623 682 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 TAS1R3Q7RTX0 852 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 ZBTB33Q86T24 672 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 ADPGKQ9BRR6 497 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 TMEM175Q9BSA9 504 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 TARS2Q9BW92 718 aaKnown RBP12.71□□□□□ -0.37
CDHR3-205ENST00000468143 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 VN1R3Q9BXE9 311 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 CD320Q9NPF0 282 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
CDHR3-205ENST00000468143 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 CD207Q9UJ71 328 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 FBXO2Q9UK22 296 aaPredicted RBP12.71□□□□□ -0.37
CDHR3-205ENST00000468143 GDAQ9Y2T3 454 aa12.71□□□□□ -0.37
CDHR3-205ENST00000468143 INPPL1O15357 1258 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 MBTPS2O43462 519 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 PLS3P13797 630 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 OSTNP61366 133 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
CDHR3-205ENST00000468143 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
CDHR3-205ENST00000468143 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
CDHR3-205ENST00000468143 TAS1R1Q7RTX1 841 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 RAD54LQ92698 747 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 MSLNLQ96KJ4 702 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 RPS6KC1Q96S38 1066 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 ZHX3Q9H4I2 956 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
CDHR3-205ENST00000468143 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 MARCH5Q9NX47 278 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 ARHGAP28Q9P2N2 729 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
CDHR3-205ENST00000468143 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
CDHR3-205ENST00000468143 PHLPP2Q6ZVD8 1323 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 ATG2AQ2TAZ0 1938 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 C2CD2LO14523 706 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 CLASP2O75122 1294 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 RECQL4O94761 1208 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 CTSAP10619 480 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 DSC1Q08554 894 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 BMS1Q14692 1282 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 SLC39A14Q15043 492 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 CEP120Q8N960 986 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 ZBTB45Q96K62 511 aaPredicted RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 ACO2Q99798 780 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 PAAF1Q9BRP4 392 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 TCHPQ9BT92 498 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 MRPL4Q9BYD3 311 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 TNFSF13BQ9Y275 285 aa12.69□□□□□ -0.38
CDHR3-205ENST00000468143 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
CDHR3-205ENST00000468143 CARNS1A5YM72 827 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 CASTOR2A6NHX0 329 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 PTGESO14684 152 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 SLC26A4O43511 780 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 NR1I2O75469 434 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 HARSP12081 509 aaKnown RBP12.68□□□□□ -0.38
CDHR3-205ENST00000468143 DDIT3P35638 169 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 SMTNP53814 917 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 GRIK3Q13003 919 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 STRN3Q13033 797 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 COASYQ13057 564 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
CDHR3-205ENST00000468143 KCNC3Q14003 757 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 GIT2Q14161 759 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 STK38Q15208 465 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 ANKRD54Q6NXT1 300 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 GJD3Q8N144 294 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 MYCT1Q8N699 235 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 SPIRE2Q8WWL2 714 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms