RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 APBA2Q99767 749 aa11.03□□□□□ -0.64
MSH5-213ENST00000468136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.03□□□□□ -0.64
MSH5-213ENST00000468136 MSTO1Q9BUK6 570 aa11.03□□□□□ -0.64
MSH5-213ENST00000468136 KIFC3Q9BVG8 833 aa11.03□□□□□ -0.64
MSH5-213ENST00000468136 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
MSH5-213ENST00000468136 FZD8Q9H461 694 aa11.03□□□□□ -0.64
MSH5-213ENST00000468136 RAB20Q9NX57 234 aa11.03□□□□□ -0.64
MSH5-213ENST00000468136 PLXNA1Q9UIW2 1896 aa11.02□□□□□ -0.64
MSH5-213ENST00000468136 A6NJR5 290 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 H3BRB1 525 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 OGTO15294 1046 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 EVI5O60447 810 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 MSCO60682 206 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 C22orf31O95567 290 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 PRKCBP05771 671 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 ADRB2P07550 413 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 H2AFZP0C0S5 128 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 ACTN1P12814 892 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 TCP1P17987 556 aaKnown RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 GCLMP48507 274 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 PTK2Q05397 1052 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 ZACNQ401N2 412 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 EFCAB12Q6NXP0 572 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 C15orf39Q6ZRI6 1047 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 H2AFVQ71UI9 128 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 SRGAP1Q7Z6B7 1085 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 ZNF677Q86XU0 584 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 BRSK2Q8IWQ3 736 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 PDCL2Q8N4E4 241 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 RNF149Q8NC42 400 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 SMC1BQ8NDV3 1235 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 AFG1LQ8WV93 481 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 UBXN4Q92575 508 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 USP6NLQ92738 828 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 CGRRF1Q99675 332 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 ACO2Q99798 780 aaKnown RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 KATNAL1Q9BW62 490 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 FAM124BQ9H5Z6 455 aaPredicted RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 TUT1Q9H6E5 874 aaKnown RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 PDGFCQ9NRA1 345 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 RBAKQ9NYW8 714 aaPredicted RBP11.02□□□□□ -0.65
MSH5-213ENST00000468136 NAGPAQ9UK23 515 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 TNFSF13BQ9Y275 285 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 TELO2Q9Y4R8 837 aa11.02□□□□□ -0.65
MSH5-213ENST00000468136 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSH5-213ENST00000468136 ZNF263O14978 683 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 CA12O43570 354 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SORBS3O60504 671 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 IL18RAPO95256 599 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 MMP3P08254 477 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 GZMAP12544 262 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 INSRRP14616 1297 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 TNFAIP3P21580 790 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 MARK3P27448 753 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 ADCYAP1R1P41586 468 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 MATR3P43243 847 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSH5-213ENST00000468136 CPT1AP50416 773 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SOX10P56693 466 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 CYP27A1Q02318 531 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 NCBP1Q09161 790 aaKnown RBP11.01□□□□□ -0.65
MSH5-213ENST00000468136 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SV2AQ7L0J3 742 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 ZNF571Q7Z3V5 609 aaPredicted RBP11.01□□□□□ -0.65
MSH5-213ENST00000468136 NT5DC4Q86YG4 428 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 WDR49Q8IV35 697 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 FAM71AQ8IYT1 594 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SHC3Q92529 594 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 TAF4BQ92750 862 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 GOLGA1Q92805 767 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SAAL1Q96ER3 474 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 C16orf70Q9BSU1 422 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 TARS2Q9BW92 718 aaKnown RBP11.01□□□□□ -0.65
MSH5-213ENST00000468136 IMPG2Q9BZV3 1241 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
MSH5-213ENST00000468136 LACRTQ9GZZ8 138 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 UBE2TQ9NPD8 197 aaPredicted RBP11.01□□□□□ -0.65
MSH5-213ENST00000468136 C1orf112Q9NSG2 853 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 ADAMTS1Q9UHI8 967 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 ZHX1Q9UKY1 873 aaPredicted RBP11.01□□□□□ -0.65
MSH5-213ENST00000468136 NENFQ9UMX5 172 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SAR1BQ9Y6B6 198 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 NRCAMQ92823 1304 aa11.01□□□□□ -0.65
MSH5-213ENST00000468136 SIP14410 1827 aa11□□□□□ -0.65
MSH5-213ENST00000468136 DOCK5Q9H7D0 1870 aa11□□□□□ -0.65
MSH5-213ENST00000468136 GOLGA8IPA6NC78 632 aa11□□□□□ -0.65
MSH5-213ENST00000468136 GOLGA8JA6NMD2 632 aa11□□□□□ -0.65
MSH5-213ENST00000468136 CES2O00748 559 aa11□□□□□ -0.65
MSH5-213ENST00000468136 C4BPAP04003 597 aaKnown RBP11□□□□□ -0.65
MSH5-213ENST00000468136 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
MSH5-213ENST00000468136 MCF2P10911 925 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms