RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ATP8A1Q9Y2Q0 1164 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 PRSS38A1L453 326 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 ANKRD62A6NC57 917 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 K7ESF4 209 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 BRINP1O60477 761 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 CDKN1CP49918 316 aaPredicted RBP6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 NRG3P56975 720 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 TAP1Q03518 808 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 DUSP2Q05923 314 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 LILRA3Q8N6C8 439 aaPredicted RBP6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 RSAD2Q8WXG1 361 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 DCLRE1CQ96SD1 692 aaKnown RBP6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 TTC1Q99614 292 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 WNT8AQ9H1J5 351 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 MS4A5Q9H3V2 200 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 CLCA2Q9UQC9 943 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 HDAC5Q9UQL6 1122 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 COL4A3BPQ9Y5P4 624 aa6.22□□□□□ -1.41
PRPF40A-205ENST00000467114 CENPVL1A0A0U1RR11 272 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 TMEM200CA6NKL6 621 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 APOBEC3AP31941 199 aaPredicted RBP6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 LSP1P33241 339 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 FAM189BP81408 668 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 OCRLQ01968 901 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 PTPROQ16827 1216 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 LMBR1LQ6UX01 489 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 PRIMA1Q86XR5 153 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 SLC41A1Q8IVJ1 513 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 APOBEC2Q9Y235 224 aaKnown RBP6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 CHST2Q9Y4C5 530 aa6.21□□□□□ -1.42
PRPF40A-205ENST00000467114 GAGE12BA1L429 117 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 LCHNA4D1U4 455 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 GAGE12HA6NDE8 117 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 MGAT5Q09328 741 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 UBE3CQ15386 1083 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 HECTD2Q5U5R9 776 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 DRICH1Q6PGQ1 229 aaPredicted RBP6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 GDF7Q7Z4P5 450 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 XYLT1Q86Y38 959 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 LYSMD2Q8IV50 215 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 GLB1L2Q8IW92 636 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 BEND2Q8NDZ0 799 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 SLC5A5Q92911 643 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 USP7Q93009 1102 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 VTA1Q9NP79 307 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 DKK2Q9UBU2 259 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 PRSS50Q9UI38 385 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 PPP2R3BQ9Y5P8 575 aa6.2□□□□□ -1.42
PRPF40A-205ENST00000467114 PRR5-ARHGAP8B1AHC4 643 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 LEFTY2O00292 366 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 RNASET2O00584 256 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 LPXNO60711 386 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 NUDT3O95989 172 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 ZEB1P37275 1124 aaPredicted RBP6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 MANFP55145 182 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 IL2P60568 153 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 ERVK-21P61565 698 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 CSRP2Q16527 193 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 ATP13A4Q4VNC1 1196 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 C19orf54Q5BKX5 351 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 BROXQ5VW32 411 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 Q6YL49 198 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 FRMD7Q6ZUT3 714 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 RASSF3Q86WH2 238 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 ARHGEF19Q8IW93 802 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 PRPF38AQ8NAV1 312 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 CYP4F11Q9HBI6 524 aa6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 EVLQ9UI08 416 aaPredicted RBP6.19□□□□□ -1.42
PRPF40A-205ENST00000467114 DIRC3C9JPN6 131 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 LTA4HP09960 611 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 ZSCAN20P17040 1043 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 CDK11BP21127 795 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 MEF2AQ02078 507 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 APBA1Q02410 837 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 PPARAQ07869 468 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 SART3Q15020 963 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 PDCD1Q15116 288 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 INAVAQ3KP66 663 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 RNF219Q5W0B1 726 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 BTNL9Q6UXG8 535 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 SYT12Q8IV01 421 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 SERHL2Q9H4I8 314 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 RIOX1Q9H6W3 641 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 AKIP1Q9NQ31 210 aa6.18□□□□□ -1.42
PRPF40A-205ENST00000467114 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 NCR1O76036 304 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 PRKD3O94806 890 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 CNGA1P29973 690 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 BMPR1AP36894 532 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 BEAN1Q3B7T3 259 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 OLFML1Q6UWY5 402 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 SPATS2Q86XZ4 545 aaKnown RBP6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 OR14C36Q8NHC7 312 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 WDR66Q8TBY9 1149 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 ORAI2Q96SN7 254 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 SYNPO2LQ9H987 977 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms