RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GAS2L3Q86XJ1 694 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 DBF4BQ8NFT6 615 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 APBB2Q92870 758 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 FBXL18Q96ME1 805 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 EIF2AQ9BY44 585 aaKnown RBP12.18□□□□□ -0.46
VCP-204ENST00000466100 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
VCP-204ENST00000466100 CBX8Q9HC52 389 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 HSPBP1Q9NZL4 362 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 ANKFY1Q9P2R3 1169 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 COL4A6Q14031 1691 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 OGTO15294 1046 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 CLDN3O15551 220 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
VCP-204ENST00000466100 NPTXRO95502 500 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 ATF7P17544 494 aaPredicted RBP12.17□□□□□ -0.46
VCP-204ENST00000466100 NR2F2P24468 414 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
VCP-204ENST00000466100 MYL5Q02045 173 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 DCAF4L1Q3SXM0 396 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 ZBTB41Q5SVQ8 909 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 SPATA1Q5VX52 437 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 CRELD2Q6UXH1 353 aaPredicted RBP12.17□□□□□ -0.46
VCP-204ENST00000466100 DEFB128Q7Z7B8 93 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 ZBTB33Q86T24 672 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 IRF2BP1Q8IU81 584 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 AOPEPQ8N6M6 819 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 CEP120Q8N960 986 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 POMGNT1Q8WZA1 660 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 SEPT8Q92599 483 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 TSG101Q99816 390 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 MSTO1Q9BUK6 570 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 FTHL17Q9BXU8 183 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
VCP-204ENST00000466100 PCIF1Q9H4Z3 704 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 RGS18Q9NS28 235 aa12.17□□□□□ -0.46
VCP-204ENST00000466100 AGO2Q9UKV8 859 aaKnown RBP12.17□□□□□ -0.46
VCP-204ENST00000466100 TRANK1O15050 2925 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 C9IYK1 514 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 KIAA0391O15091 583 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 ZNF623O75123 536 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 AKAP3O75969 853 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 ADRB2P07550 413 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 PFKMP08237 780 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 SYN1P17600 705 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 CASP4P49662 377 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 RGS19P49795 217 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 CYP2J2P51589 502 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 MCCD1P59942 119 aaPredicted RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 FAM189BP81408 668 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 NCBP1Q09161 790 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 TMEM132AQ24JP5 1023 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 CDKAL1Q5VV42 579 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 C16orf59Q7L2K0 433 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 ZNF598Q86UK7 904 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 TMEM192Q8IY95 271 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 XXYLT1Q8NBI6 393 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 SMG8Q8ND04 991 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 BADQ92934 168 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 SAAL1Q96ER3 474 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 EEF2KMTQ96G04 330 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 BORCS6Q96GS4 357 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 ADAM2Q99965 735 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 ADPGKQ9BRR6 497 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 NXF3Q9H4D5 531 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 PRKAG2Q9UGJ0 569 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 CPSF3Q9UKF6 684 aaKnown RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
VCP-204ENST00000466100 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
VCP-204ENST00000466100 A0A0U1RQF3 1178 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 GOLGA8IPA6NC78 632 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 GOLGA8JA6NMD2 632 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 CETN3O15182 167 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 MAPK13O15264 365 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 EXTL3O43909 919 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 HARSP12081 509 aaKnown RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 ZNF18P17022 549 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 RPL13P26373 211 aaKnown RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 TNFSF9P41273 254 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 GRM5P41594 1212 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 RAB27AP51159 221 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 EPHB4P54760 987 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 MARSP56192 900 aaKnown RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 WNT7BP56706 349 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 FPGSQ05932 587 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 PPIGQ13427 754 aaKnown RBP eCLIP12.15□□□□□ -0.464e-7■■□□□ 14.2
VCP-204ENST00000466100 ADAM9Q13443 819 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 FILIP1Q7Z7B0 1213 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms