RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 NDUFB10O96000 172 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 CHKAP35790 457 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 GCLMP48507 274 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 RRP1BQ14684 758 aaKnown RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 NUGGCQ68CJ6 796 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 RNF207Q6ZRF8 634 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 MIGA2Q7L4E1 593 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 NOP9Q86U38 636 aaKnown RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 FAM212AQ96EL1 285 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 ROPN1BQ9BZX4 212 aaPredicted RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 ROPN1Q9HAT0 212 aaPredicted RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 DNAJC17Q9NVM6 304 aaKnown RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 SUGT1Q9Y2Z0 365 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 A8MUI8 341 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 GDF11O95390 407 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 ANP32DO95626 131 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 ECEL1O95672 775 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 UBXN2AP68543 259 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 CALCOCO2Q13137 446 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 CRYMQ14894 314 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 STXBP4Q6ZWJ1 553 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 ZNF564Q8TBZ8 553 aaPredicted RBP19.79■□□□□ 0.76
HPS3-204ENST00000462030 L3MBTL3Q96JM7 780 aaPredicted RBP19.79■□□□□ 0.76
HPS3-204ENST00000462030 CRAMP1Q96RY5 1269 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 PNMA3Q9UL41 463 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 SPATA31A6Q5VVP1 1343 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 GH1P01241 217 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 SERPINB2P05120 415 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 NAA25Q14CX7 972 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 ZKSCAN8Q15776 578 aaPredicted RBP19.79■□□□□ 0.76
HPS3-204ENST00000462030 DOK7Q18PE1 504 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 TRMT10CQ7L0Y3 403 aaKnown RBP19.79■□□□□ 0.76
HPS3-204ENST00000462030 ZSWIM2Q8NEG5 633 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 GDAP1Q8TB36 358 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 EPS8L1Q8TE68 723 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 C1orf54Q8WWF1 131 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 NUP85Q9BW27 656 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 COA1Q9GZY4 146 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 C15orf41Q9Y2V0 281 aa19.79■□□□□ 0.76
HPS3-204ENST00000462030 A0A1B0GUA9 196 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 CLDN3O15551 220 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 ALADP13716 330 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 SNX1Q13596 522 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 NSMFQ6X4W1 530 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 KCNK9Q9NPC2 374 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 MTA2O94776 668 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 SUN1O94901 812 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 KRT16P08779 473 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 PAX7P23759 505 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 KRT17Q04695 432 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 BNIP1Q12981 228 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 PPP2R5CQ13362 524 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 MPP2Q14168 576 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 EPC2Q52LR7 807 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 MAEAQ7L5Y9 396 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 SLC9A9Q8IVB4 645 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 DAW1Q8N136 415 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 KCTD17Q8N5Z5 321 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 C12orf50Q8NA57 414 aaPredicted RBP19.78■□□□□ 0.76
HPS3-204ENST00000462030 TEKT1Q969V4 418 aa19.78■□□□□ 0.76
HPS3-204ENST00000462030 RSRC1Q96IZ7 334 aaKnown RBP19.78■□□□□ 0.76
HPS3-204ENST00000462030 NOCTQ9UK39 431 aaKnown RBP19.78■□□□□ 0.76
HPS3-204ENST00000462030 ZNFX1Q9P2E3 1918 aaKnown RBP19.77■□□□□ 0.76
HPS3-204ENST00000462030 HIP1RO75146 1068 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 PRELPP51888 382 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 COPS2P61201 443 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 C1orf220Q5T0J3 134 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 TEX2Q8IWB9 1127 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 SERPINB12Q96P63 405 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 STRA6Q9BX79 667 aa19.77■□□□□ 0.76
HPS3-204ENST00000462030 K7ENM7 598 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 HGSO14964 777 aaPredicted RBP19.77■□□□□ 0.75
HPS3-204ENST00000462030 VAMP7P51809 220 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 SLC47A2Q86VL8 602 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 FITM2Q8N6M3 262 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 CCHCR1Q8TD31 782 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 PLEKHO2Q8TD55 490 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 KLHL29Q96CT2 875 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 LRRC19Q9H756 370 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 TRIM33Q9UPN9 1127 aa19.77■□□□□ 0.75
HPS3-204ENST00000462030 CYP26A1O43174 497 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 GAS7O60861 476 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 RHBDF2Q6PJF5 856 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 SH3BP5LQ7L8J4 393 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 SPATA21Q7Z572 469 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 CKAP2Q8WWK9 683 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 SLC5A5Q92911 643 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 ZNF653Q96CK0 615 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 CBWD1Q9BRT8 395 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 ASIC3Q9UHC3 531 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 CFBP00751 764 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 RWDD2BP57060 319 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 MAP2K1Q02750 393 aaPredicted RBP19.76■□□□□ 0.75
HPS3-204ENST00000462030 TRIP13Q15645 432 aaPredicted RBP19.76■□□□□ 0.75
HPS3-204ENST00000462030 HHIPL2Q6UWX4 724 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 SPICE1Q8N0Z3 855 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 MORC4Q8TE76 937 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 PSPC1Q8WXF1 523 aaKnown RBP19.76■□□□□ 0.75
HPS3-204ENST00000462030 RMDN2Q96LZ7 410 aa19.76■□□□□ 0.75
HPS3-204ENST00000462030 NACC1Q96RE7 527 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms