RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 BIRC2Q13490 618 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 VPS72Q15906 364 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 ATP2B3Q16720 1220 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 MAP9Q49MG5 647 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 NT5DC1Q5TFE4 455 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 TRIM68Q6AZZ1 485 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 KSR2Q6VAB6 950 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SAPCD2Q86UD0 394 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 GRAMD1CQ8IYS0 662 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 BCL6BQ8N143 479 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 MORC4Q8TE76 937 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SNX33Q8WV41 574 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 NRG4Q8WWG1 115 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 RIN2Q8WYP3 895 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 ZCCHC14Q8WYQ9 949 aaKnown RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 RGMAQ96B86 450 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SLC7A6OSQ96CW6 309 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 AJUBAQ96IF1 538 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 LOXL4Q96JB6 756 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SLC2A13Q96QE2 648 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 ACO2Q99798 780 aaKnown RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 FDXACB1Q9BRP7 624 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SOX7Q9BT81 388 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 CARD11Q9BXL7 1154 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 PRDM12Q9H4Q4 367 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 DNAI1Q9UI46 699 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SERPINB13Q9UIV8 391 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 STXBP5LQ9Y2K9 1186 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 COMMD10Q9Y6G5 202 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 ARID4BQ4LE39 1312 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 CCDC154A6NI56 674 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TPP1O14773 563 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TEX33O43247 280 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 B3GALT2O43825 422 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 PRAMEF4O60810 478 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TMEM127O75204 238 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 PEX14O75381 377 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TUSC2O75896 110 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 KLHL18O94889 574 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 IFIT2P09913 472 aaKnown RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 GAAP10253 952 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 GYPEP15421 78 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 RHCEP18577 417 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 CTSSP25774 331 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 FXR1P51114 621 aaKnown RBP eCLIP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 KCNQ1P51787 676 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 SLURP1P55000 103 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 GJA9P57773 515 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 CCT2P78371 535 aaKnown RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 RHDQ02161 417 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 DLX2Q07687 328 aaPredicted RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 SMAD4Q13485 552 aaKnown RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 ZNF267Q14586 743 aaPredicted RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 USP10Q14694 798 aaKnown RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 GRM3Q14832 879 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 RAB39AQ14964 217 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 ANO6Q4KMQ2 910 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 GAGE13Q4V321 117 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 CRB2Q5IJ48 1285 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 GORABQ5T7V8 394 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TAS1R1Q7RTX1 841 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 DRC7Q8IY82 874 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 KLHL36Q8N4N3 616 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 PPM1NQ8N819 430 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 ZBTB34Q8NCN2 500 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 FNIP1Q8TF40 1166 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 CDK5RAP3Q96JB5 506 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 YTHDC1Q96MU7 727 aaKnown RBP3.84□□□□□ -1.79
HDAC6-212ENST00000461608 RPS6KC1Q96S38 1066 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 PTPN18Q99952 460 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TMEM168Q9H0V1 697 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 MYH16Q9H6N6 1097 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 BCO1Q9HAY6 547 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 LANCL2Q9NS86 450 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 TDP1Q9NUW8 608 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 CALCOCO1Q9P1Z2 691 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 USP25Q9UHP3 1055 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 INTUQ9ULD6 942 aa3.84□□□□□ -1.79
HDAC6-212ENST00000461608 CAPN8A6NHC0 703 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 FOXN3O00409 490 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 GOLIM4O00461 696 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 TPD52L2O43399 206 aaKnown RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 AKR1B10O60218 316 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 MGEA5O60502 916 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 FZD7O75084 574 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 UBXN7O94888 489 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 FTLP02792 175 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 CYP1A1P04798 512 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 JUNP05412 331 aaKnown RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 FTH1P19P0C7X4 201 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 RPL17P18621 184 aaKnown RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 TACR2P21452 398 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 EDNRBP24530 442 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 IL13P35225 146 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 STAT5BP51692 787 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 AGFG1P52594 562 aaKnown RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 GPSM2P81274 684 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 CD69Q07108 199 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 PPP3CAQ08209 521 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms