RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CMPK2Q5EBM0 449 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 ARSHQ5FYA8 562 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 AGGF1Q8N302 714 aaeCLIP16.6■□□□□ 0.25
SSR4-206ENST00000460616 EYA3Q99504 573 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 MXD3Q9BW11 206 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 POTEB3A0JP26 581 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 POTECB2RU33 542 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 MYBL1P10243 752 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 ALAS1P13196 640 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 KLC1Q07866 573 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 CALCOCO2Q13137 446 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
SSR4-206ENST00000460616 TMEM154Q6P9G4 183 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 POTEBQ6S5H4 581 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 ARHGEF18Q6ZSZ5 1173 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 GALNT15Q8N3T1 639 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 MYLK2Q9H1R3 596 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
SSR4-206ENST00000460616 LAMB1P07942 1786 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 MIF4GDA9UHW6 222 aaKnown RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 PDXKO00764 312 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 TNFAIP3P21580 790 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 HOXD13P35453 343 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 CASP4P49662 377 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 SGSM1Q2NKQ1 1148 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 ZNF568Q3ZCX4 644 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 FAM13CQ8NE31 585 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 KRT35Q92764 455 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 CTNNAL1Q9UBT7 734 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 ASB3Q9Y575 518 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 ADAMTSL1Q8N6G6 1762 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 GTPBP10A4D1E9 387 aaKnown RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 ANKRD62A6NC57 917 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 hCG_1984214I3L0E3 225 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 ECE2O60344 883 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 TTLL1O95922 423 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.254e-12■■■□□ 16.3
SSR4-206ENST00000460616 GM2AP17900 193 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 COILP38432 576 aaPredicted RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 GTF2IP78347 998 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 TSNAXIP1Q2TAA8 658 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSR4-206ENST00000460616 ZNF713Q8N859 430 aaPredicted RBP16.59■□□□□ 0.25
SSR4-206ENST00000460616 TMEM237Q96Q45 408 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 NKIRAS1Q9NYS0 192 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 TAS2R14Q9NYV8 317 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 HAO1Q9UJM8 370 aa16.59■□□□□ 0.25
SSR4-206ENST00000460616 PSME4Q14997 1843 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 USP17L5A8MUK1 530 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 IRF6O14896 467 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 GGPS1O95749 300 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 NR3C1P04150 777 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 TARSP26639 723 aaKnown RBP16.58■□□□□ 0.25
SSR4-206ENST00000460616 PTDSS1P48651 473 aaKnown RBP16.58■□□□□ 0.25
SSR4-206ENST00000460616 DRAP1Q14919 205 aaPredicted RBP16.58■□□□□ 0.25
SSR4-206ENST00000460616 ASAP3Q8TDY4 903 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 DNAJC9Q8WXX5 260 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 C2CD2Q9Y426 696 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.25
SSR4-206ENST00000460616 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 YDJCA8MPS7 323 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 ACADSP16219 412 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 ALDH3A1P30838 453 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 KCNJ1P48048 391 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 MARCKSL1P49006 195 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 PDCD2Q16342 344 aaPredicted RBP16.58■□□□□ 0.24
SSR4-206ENST00000460616 APBB1IPQ7Z5R6 666 aaPredicted RBP16.58■□□□□ 0.24
SSR4-206ENST00000460616 LONP2Q86WA8 852 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 ENDOVQ8N8Q3 282 aaKnown RBP16.58■□□□□ 0.24
SSR4-206ENST00000460616 ERP27Q96DN0 273 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 RPS6KC1Q96S38 1066 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 ZNF287Q9HBT7 754 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 DNAJC12Q9UKB3 198 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 SBF1O95248 1867 aa16.58■□□□□ 0.24
SSR4-206ENST00000460616 MAST2Q6P0Q8 1798 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 G3V3G9 751 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 H0Y3Z8 333 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 MAP3K13O43283 966 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 TAC1P20366 129 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 POLGP54098 1239 aaPredicted RBP16.57■□□□□ 0.24
SSR4-206ENST00000460616 SLC12A3P55017 1021 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 LMNB2Q03252 620 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 STRN3Q13033 797 aa16.57■□□□□ 0.24
SSR4-206ENST00000460616 CTTNQ14247 550 aaKnown RBP16.57■□□□□ 0.24
SSR4-206ENST00000460616 UBE2SQ16763 222 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms