RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 RNF223E7ERA6 249 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 FIBPO43427 364 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 TOP1P11387 765 aaKnown RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 CRYBB1P53674 252 aaPredicted RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 FUT2Q10981 343 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 HNRNPDQ14103 355 aaKnown RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 DGKKQ5KSL6 1271 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 TANGO2Q6ICL3 276 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 ZSCAN25Q6NSZ9 544 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 PDXDC1Q6P996 788 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 MTHFD1LQ6UB35 978 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 IRF7Q92985 503 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 OSMRQ99650 979 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 SENP7Q9BQF6 1050 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 CPVLQ9H3G5 476 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 ZNF334Q9HCZ1 680 aaPredicted RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 MAP3K20Q9NYL2 800 aaKnown RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 COL4A2P08572 1712 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.94
NCSTN-209ENST00000459963 ZMYM2Q9UBW7 1377 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 MYH7P12883 1935 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 WDR81Q562E7 1941 aa9.21□□□□□ -0.94
NCSTN-209ENST00000459963 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
NCSTN-209ENST00000459963 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 OPLAHO14841 1288 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 EXTL3O43909 919 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 MAFO75444 373 aaPredicted RBP9.2□□□□□ -0.94
NCSTN-209ENST00000459963 STAM2O75886 525 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 APPP05067 770 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 SNHG28P0DPA3 235 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 MAPK8P45983 427 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 MRPS9P82933 396 aaKnown RBP9.2□□□□□ -0.94
NCSTN-209ENST00000459963 GRM2Q14416 872 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 WDR44Q5JSH3 913 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 LILRA6Q6PI73 481 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 GPR155Q7Z3F1 870 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 MAP4K3Q8IVH8 894 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
NCSTN-209ENST00000459963 SPSB2Q99619 263 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 HERC2P3Q9BVR0 1158 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 TRMT61BQ9BVS5 477 aaKnown RBP9.2□□□□□ -0.94
NCSTN-209ENST00000459963 UBA5Q9GZZ9 404 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 IL17BQ9UHF5 180 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 F5P12259 2224 aa9.2□□□□□ -0.94
NCSTN-209ENST00000459963 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 SPTAN1Q13813 2472 aaKnown RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 DCLK1O15075 740 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GNAT2P19087 354 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 HOXA13P31271 388 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GCGRP47871 477 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GLUD2P49448 558 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 MLLT6P55198 1093 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 RNASELQ05823 741 aaKnown RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 PPARAQ07869 468 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 KARSQ15046 597 aaKnown RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 KIZQ2M2Z5 673 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 QRICH1Q2TAL8 776 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 C4orf17Q53FE4 359 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 TAF1BQ53T94 588 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GPATCH4Q5T3I0 446 aaKnown RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 C1orf228Q6PIY5 440 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 TAS1R1Q7RTX1 841 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 KIAA0319LQ8IZA0 1049 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 PNPLA1Q8N8W4 532 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GIMAP8Q8ND71 665 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 ING5Q8WYH8 240 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 MSANTD3Q96H12 275 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 PPP1R16BQ96T49 567 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 ARID3AQ99856 593 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GBP3Q9H0R5 595 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 BOLA2Q9H3K6 86 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 RTEL1Q9NZ71 1219 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 GDE1Q9NZC3 331 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 KCNH3Q9ULD8 1083 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 SALL3Q9BXA9 1300 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 MTCL1Q9Y4B5 1905 aaKnown RBP9.19□□□□□ -0.94
NCSTN-209ENST00000459963 DOCK6Q96HP0 2047 aa9.19□□□□□ -0.94
NCSTN-209ENST00000459963 UBR5O95071 2799 aaPredicted RBP9.18□□□□□ -0.94
NCSTN-209ENST00000459963 B4GALT3O60512 393 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 RANBP6O60518 1105 aaKnown RBP9.18□□□□□ -0.94
NCSTN-209ENST00000459963 HNRNPA1P09651 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
NCSTN-209ENST00000459963 FTH1P19P0C7X4 201 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 GOLGA8HP0CJ92 632 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 TSC2P49815 1807 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 TRIP6Q15654 476 aaKnown RBP9.18□□□□□ -0.94
NCSTN-209ENST00000459963 TRIM61Q5EBN2 209 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 RRP12Q5JTH9 1297 aaKnown RBP9.18□□□□□ -0.94
NCSTN-209ENST00000459963 SYNPOQ8N3V7 929 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 HDDC3Q8N4P3 179 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 MCRS1Q96EZ8 462 aa9.18□□□□□ -0.94
NCSTN-209ENST00000459963 NUSAP1Q9BXS6 441 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms