RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PRIMPOLQ96LW4 560 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 PLAGL2Q9UPG8 496 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 C17orf102A2RUQ5 167 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 SOWAHDA6NJG2 315 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 GNAT1P11488 350 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 CYP2C9P11712 490 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 PROZP22891 400 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 GTF2H1P32780 548 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 NLRP11P59045 1033 aaKnown RBP26.54■■□□□ 1.84
U2AF1-204ENST00000459639 POLR2FP61218 127 aaKnown RBP26.54■■□□□ 1.84
U2AF1-204ENST00000459639 CDK17Q00537 523 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 MCL1Q07820 350 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 PSMD6Q15008 389 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 ATF7IP2Q5U623 682 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 TRIM65Q6PJ69 517 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 ZNF296Q8WUU4 475 aaPredicted RBP26.54■■□□□ 1.84
U2AF1-204ENST00000459639 NLRP7Q8WX94 980 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 SIX2Q9NPC8 291 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 DAAM1Q9Y4D1 1078 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 CNTNAP2Q9UHC6 1331 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 LRRIQ3A6PVS8 624 aaPredicted RBP26.53■■□□□ 1.84
U2AF1-204ENST00000459639 ABLIM1O14639 778 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 CCP110O43303 1012 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 ACTN1P12814 892 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 CST5P28325 142 aaPredicted RBP26.53■■□□□ 1.84
U2AF1-204ENST00000459639 WDR59Q6PJI9 974 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 MPZL3Q6UWV2 235 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 CRELD2Q6UXH1 353 aaPredicted RBP26.53■■□□□ 1.84
U2AF1-204ENST00000459639 RRAGAQ7L523 313 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 SRGAP1Q7Z6B7 1085 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 C7orf31Q8N865 590 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 CCDC127Q96BQ5 260 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 TNFSF13BQ9Y275 285 aa26.53■■□□□ 1.84
U2AF1-204ENST00000459639 LRRC53A6NM62 1247 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 UCHL3P15374 230 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 GCLMP48507 274 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 MXI1P50539 228 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 HIC1Q14526 733 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 RAD9BQ6WBX8 426 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 SYN2Q92777 582 aaPredicted RBP26.52■■□□□ 1.84
U2AF1-204ENST00000459639 SCLT1Q96NL6 688 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 PPP1R16BQ96T49 567 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 TCHPQ9BT92 498 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 INTS2Q9H0H0 1204 aaKnown RBP26.52■■□□□ 1.84
U2AF1-204ENST00000459639 PTPRHQ9HD43 1115 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 NLRC4Q9NPP4 1024 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 HDAC6Q9UBN7 1215 aa26.52■■□□□ 1.84
U2AF1-204ENST00000459639 IQCF3P0C7M6 154 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 ACOT2P49753 483 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 APBA1Q02410 837 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 AMHR2Q16671 573 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 SLAIN1Q8ND83 568 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 KLHDC9Q8NEP7 349 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 TMEM117Q9H0C3 514 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 FAM49AQ9H0Q0 323 aaPredicted RBP26.51■■□□□ 1.83
U2AF1-204ENST00000459639 TMEM8AQ9HCN3 771 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 MYO6Q9UM54 1294 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 FRMPD3Q5JV73 1810 aa26.51■■□□□ 1.83
U2AF1-204ENST00000459639 OGTO15294 1046 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 B4GALT5O43286 388 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 FAM189A1O60320 539 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 CLDN10P78369 228 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 TMEM132AQ24JP5 1023 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 EPC2Q52LR7 807 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 CXCL17Q6UXB2 119 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 RUFY4Q6ZNE9 571 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 PPP1R13LQ8WUF5 828 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 ADAMTS10Q9H324 1103 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 RBAKQ9NYW8 714 aaPredicted RBP26.5■■□□□ 1.83
U2AF1-204ENST00000459639 DDX20Q9UHI6 824 aaKnown RBP26.5■■□□□ 1.83
U2AF1-204ENST00000459639 TREHO43280 583 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 MTF1Q14872 753 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 ZNF568Q3ZCX4 644 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 KRT39Q6A163 491 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 ZBTB33Q86T24 672 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 ZNF710Q8N1W2 664 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 EHBP1Q8NDI1 1231 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 LMO3Q8TAP4 145 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 CHP1Q99653 195 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 FHOD1Q9Y613 1164 aa26.5■■□□□ 1.83
U2AF1-204ENST00000459639 USP27XA6NNY8 438 aa26.49■■□□□ 1.83
U2AF1-204ENST00000459639 ZSCAN12O43309 604 aa26.49■■□□□ 1.83
U2AF1-204ENST00000459639 HARSP12081 509 aaKnown RBP26.49■■□□□ 1.83
U2AF1-204ENST00000459639 RFX1P22670 979 aa26.49■■□□□ 1.83
U2AF1-204ENST00000459639 TOGARAM2Q6ZUX3 1019 aa26.49■■□□□ 1.83
U2AF1-204ENST00000459639 BRSK2Q8IWQ3 736 aa26.49■■□□□ 1.83
U2AF1-204ENST00000459639 GCOM2Q9BZD3 368 aaPredicted RBP26.49■■□□□ 1.83
U2AF1-204ENST00000459639 COQ4Q9Y3A0 265 aa26.49■■□□□ 1.83
U2AF1-204ENST00000459639 GPR32O75388 356 aa26.48■■□□□ 1.83
U2AF1-204ENST00000459639 DLATP10515 647 aaKnown RBP26.48■■□□□ 1.83
U2AF1-204ENST00000459639 ZBTB41Q5SVQ8 909 aa26.48■■□□□ 1.83
U2AF1-204ENST00000459639 SFMBT2Q5VUG0 894 aa26.48■■□□□ 1.83
U2AF1-204ENST00000459639 PCSK9Q8NBP7 692 aaKnown RBP26.48■■□□□ 1.83
U2AF1-204ENST00000459639 FNBP1Q96RU3 617 aa26.48■■□□□ 1.83
U2AF1-204ENST00000459639 PPP2R2CQ9Y2T4 447 aa26.48■■□□□ 1.83
U2AF1-204ENST00000459639 ANK1P16157 1881 aa26.48■■□□□ 1.83
U2AF1-204ENST00000459639 PCBP1Q15365 356 aaKnown RBP eCLIP26.47■■□□□ 1.83
U2AF1-204ENST00000459639 KIZQ2M2Z5 673 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 EEF1DP3Q658K8 133 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 CCSAPQ6IQ19 270 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms