RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 BUB1BO60566 1050 aaPredicted RBP10.54□□□□□ -0.72
THBS3-203ENST00000457183 KRT18P05783 430 aaKnown RBP10.54□□□□□ -0.72
THBS3-203ENST00000457183 PMS2P54278 862 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 GALCP54803 685 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 NPEPPSP55786 919 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 JAM2P57087 298 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 DR1Q01658 176 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 PRPF4BQ13523 1007 aaKnown RBP10.54□□□□□ -0.72
THBS3-203ENST00000457183 CRYMQ14894 314 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 DUPD1Q68J44 220 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 GJB7Q6PEY0 223 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
THBS3-203ENST00000457183 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 PGM2Q96G03 612 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 ERP44Q9BS26 406 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 MAP3K20Q9NYL2 800 aaKnown RBP10.54□□□□□ -0.72
THBS3-203ENST00000457183 KDM3AQ9Y4C1 1321 aa10.54□□□□□ -0.72
THBS3-203ENST00000457183 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 FAM170AA1A519 330 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 SMIM23A6NLE4 172 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 AKAP3O75969 853 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 CLTAP09496 248 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 ANXA13P27216 316 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 DSG3P32926 999 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 LBX1P52954 281 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 PLTPP55058 493 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 IFI35P80217 286 aaPredicted RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 GHRHRQ02643 423 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 ITIH4Q14624 930 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 EPHA7Q15375 998 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 SLC35G2Q8TBE7 412 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 NEK9Q8TD19 979 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 RNF25Q96BH1 459 aaPredicted RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 SIX2Q9NPC8 291 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 INTUQ9ULD6 942 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 COL11A1P12107 1806 aaPredicted RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 A0A1B0GUA9 196 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 MEIS2O14770 477 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 ATP2A1O14983 1001 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 GSTA1P08263 222 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 HOXD13P35453 343 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 USH1GQ495M9 461 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 UBAP2Q5T6F2 1119 aaKnown RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 TCERG1LQ5VWI1 586 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 DENND2CQ68D51 928 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 NAIF1Q69YI7 327 aaPredicted RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 FASTKD5Q7L8L6 764 aaKnown RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 CCDC63Q8NA47 563 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 PRMT1Q99873 361 aaKnown RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 TRIM6Q9C030 488 aaPredicted RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 ERVK-5Q9HDB9 667 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 TRAF3IP3Q9Y228 551 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 DAAM1Q9Y4D1 1078 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 CTDP1Q9Y5B0 961 aaPredicted RBP10.53□□□□□ -0.72
THBS3-203ENST00000457183 ZNF536O15090 1300 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 ATP8B3O60423 1300 aa10.53□□□□□ -0.72
THBS3-203ENST00000457183 CCDC169A6NNP5 214 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 VWA5AO00534 786 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 IRF6O14896 467 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 DDX3YO15523 660 aaKnown RBP10.52□□□□□ -0.72
THBS3-203ENST00000457183 GFPT2O94808 682 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 SLC12A3P55017 1021 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 SNAP25P60880 206 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 SLC29A2Q14542 456 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 KNOP1Q1ED39 458 aaKnown RBP10.52□□□□□ -0.72
THBS3-203ENST00000457183 FAM133BQ5BKY9 247 aaKnown RBP10.52□□□□□ -0.72
THBS3-203ENST00000457183 CCDC174Q6PII3 467 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 CRELD2Q6UXH1 353 aaPredicted RBP10.52□□□□□ -0.72
THBS3-203ENST00000457183 TRPM8Q7Z2W7 1104 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 TBC1D1Q86TI0 1168 aaPredicted RBP10.52□□□□□ -0.72
THBS3-203ENST00000457183 MCF2L2Q86YR7 1114 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 FBXO25Q8TCJ0 367 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 STAMBPL1Q96FJ0 436 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 OTUD5Q96G74 571 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 AZI2Q9H6S1 392 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 INTS9Q9NV88 658 aaKnown RBP10.52□□□□□ -0.72
THBS3-203ENST00000457183 GCNT4Q9P109 453 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 SAMD15Q9P1V8 674 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 SNX24Q9Y343 169 aa10.52□□□□□ -0.72
THBS3-203ENST00000457183 PPP1R12AO14974 1030 aaPredicted RBP10.52□□□□□ -0.73
THBS3-203ENST00000457183 RGS16O15492 202 aaPredicted RBP10.52□□□□□ -0.73
THBS3-203ENST00000457183 RTN2O75298 545 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
THBS3-203ENST00000457183 PABPC4Q13310 644 aaKnown RBP eCLIP10.52□□□□□ -0.73
THBS3-203ENST00000457183 DGKZQ13574 1117 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 COL13A1Q5TAT6 717 aaPredicted RBP10.52□□□□□ -0.73
THBS3-203ENST00000457183 MOXD1Q6UVY6 613 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 EGFL6Q8IUX8 553 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 LNX1Q8TBB1 728 aaPredicted RBP10.52□□□□□ -0.73
THBS3-203ENST00000457183 OPTNQ96CV9 577 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 THOC1Q96FV9 657 aaKnown RBP10.52□□□□□ -0.73
THBS3-203ENST00000457183 EBF2Q9HAK2 575 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 L3MBTL1Q9Y468 752 aa10.52□□□□□ -0.73
THBS3-203ENST00000457183 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
THBS3-203ENST00000457183 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms