RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 FUT10Q6P4F1 479 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 MOXD1Q6UVY6 613 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 PARM1Q6UWI2 310 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 FERMT3Q86UX7 667 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 EXOC8Q8IYI6 725 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 BLIDQ8IZY5 108 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 RABGGTAQ92696 567 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 CPB2Q96IY4 423 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.28■■□□□ 1.48
HMG20B-206ENST00000453933 FNIP2Q9P278 1114 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 DDX25Q9UHL0 483 aaKnown RBP24.28■■□□□ 1.48
HMG20B-206ENST00000453933 VAV3Q9UKW4 847 aa24.28■■□□□ 1.48
HMG20B-206ENST00000453933 CPLX1O14810 134 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 SLC37A4O43826 429 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 KINO60870 393 aaKnown RBP24.27■■□□□ 1.48
HMG20B-206ENST00000453933 ERLIN2O94905 339 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 REC8O95072 547 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 FSHRP23945 695 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 RFC5P40937 340 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 PPP2R5CQ13362 524 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 SNW1Q13573 536 aaKnown RBP24.27■■□□□ 1.48
HMG20B-206ENST00000453933 USP41Q3LFD5 358 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 GPR65Q8IYL9 337 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 SHDQ96IW2 340 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 APOL6Q9BWW8 343 aa24.27■■□□□ 1.48
HMG20B-206ENST00000453933 SLKQ9H2G2 1235 aaPredicted RBP24.27■■□□□ 1.48
HMG20B-206ENST00000453933 ASAP2O43150 1006 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 DEXIO95424 95 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 P4HBP07237 508 aaKnown RBP24.26■■□□□ 1.47
HMG20B-206ENST00000453933 NTHL1P78549 312 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 GRASPQ7Z6J2 395 aaPredicted RBP24.26■■□□□ 1.47
HMG20B-206ENST00000453933 GSTCDQ8NEC7 633 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 TCP11Q8WWU5 503 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 CNTNAP3BQ96NU0 1288 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 CNTNAP3Q9BZ76 1288 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 CSRNP2Q9H175 543 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 MTF2Q9Y483 593 aaPredicted RBP24.26■■□□□ 1.47
HMG20B-206ENST00000453933 PPME1Q9Y570 386 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 ZFP37Q9Y6Q3 630 aaPredicted RBP24.26■■□□□ 1.47
HMG20B-206ENST00000453933 DOCK8Q8NF50 2099 aa24.26■■□□□ 1.47
HMG20B-206ENST00000453933 KANSL1LA0AUZ9 987 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 ZBTB39O15060 712 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 DKC1O60832 514 aaKnown RBP eCLIP24.25■■□□□ 1.47
HMG20B-206ENST00000453933 AXLP30530 894 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 PTENP60484 403 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 TOB2Q14106 344 aaPredicted RBP24.25■■□□□ 1.47
HMG20B-206ENST00000453933 EMC2Q15006 297 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 NPY5RQ15761 445 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 INF2Q27J81 1249 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 NOTUMQ6P988 496 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 PRSS55Q6UWB4 352 aaPredicted RBP24.25■■□□□ 1.47
HMG20B-206ENST00000453933 RUFY3Q7L099 469 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 DDX23Q9BUQ8 820 aaKnown RBP24.25■■□□□ 1.47
HMG20B-206ENST00000453933 SPATA6Q9NWH7 488 aaPredicted RBP24.25■■□□□ 1.47
HMG20B-206ENST00000453933 ADAM28Q9UKQ2 775 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 CDH7Q9ULB5 785 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 GIT1Q9Y2X7 761 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 CEP250Q9BV73 2442 aa24.25■■□□□ 1.47
HMG20B-206ENST00000453933 KRT37O76014 449 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 AKAP5P24588 427 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 YWHABP31946 246 aaKnown RBP24.24■■□□□ 1.47
HMG20B-206ENST00000453933 ZNF528Q3MIS6 628 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 VARS2Q5ST30 1063 aaKnown RBP24.24■■□□□ 1.47
HMG20B-206ENST00000453933 C4orf19Q8IY42 314 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 DAGLBQ8NCG7 672 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 CCDC51Q96ER9 411 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 BCO2Q9BYV7 579 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 NXF3Q9H4D5 531 aaKnown RBP24.24■■□□□ 1.47
HMG20B-206ENST00000453933 KCNMB3Q9NPA1 279 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 RGL1Q9NZL6 768 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 GPR179Q6PRD1 2367 aa24.24■■□□□ 1.47
HMG20B-206ENST00000453933 PCBP1Q15365 356 aaKnown RBP eCLIP24.23■■□□□ 1.479e-6■■■□□ 18.2
HMG20B-206ENST00000453933 SLC44A4Q53GD3 710 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 XKR9Q5GH70 373 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 RTP2Q5QGT7 225 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 GALNT17Q6IS24 598 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 CPLX2Q6PUV4 134 aaKnown RBP24.23■■□□□ 1.47
HMG20B-206ENST00000453933 FAM20AQ96MK3 541 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 LXNQ9BS40 222 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 ZSWIM6Q9HCJ5 1215 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 NCDNQ9UBB6 729 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 CACNG4Q9UBN1 327 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 FBXO4Q9UKT5 387 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 COL4A3Q01955 1670 aa24.23■■□□□ 1.47
HMG20B-206ENST00000453933 INO80B-WBP1J3KQ70 363 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 LAMTOR5O43504 91 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 TADA2AO75478 443 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 CSTF1Q05048 431 aaKnown RBP24.22■■□□□ 1.47
HMG20B-206ENST00000453933 NCBP1Q09161 790 aaKnown RBP24.22■■□□□ 1.47
HMG20B-206ENST00000453933 MLF2Q15773 248 aaPredicted RBP24.22■■□□□ 1.47
HMG20B-206ENST00000453933 AMHR2Q16671 573 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 OTUD6AQ7L8S5 288 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 KRT25Q7Z3Z0 450 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 FGF13Q92913 245 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 ZNF274Q96GC6 653 aaPredicted RBP24.22■■□□□ 1.47
HMG20B-206ENST00000453933 AIFM3Q96NN9 605 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 LARP6Q9BRS8 491 aaKnown RBP24.22■■□□□ 1.47
HMG20B-206ENST00000453933 XPNPEP1Q9NQW7 623 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 KLK14Q9P0G3 267 aa24.22■■□□□ 1.47
HMG20B-206ENST00000453933 FBXW11Q9UKB1 542 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms