RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ZFP28Q8NHY6 868 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 CAGE1Q8TC20 777 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 FERMT2Q96AC1 680 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF428Q96B54 188 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 FDXACB1Q9BRP7 624 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-209ENST00000452660 R3HDMLQ9H3Y0 253 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 ALG13Q9NP73 1137 aaKnown RBP3.43□□□□□ -1.86
LRCH3-209ENST00000452660 FAM30AQ9NZY2 134 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 LPXNO60711 386 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 PROP1O75360 226 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 CFBP00751 764 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 SDSP20132 328 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 FOXI1Q12951 378 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 PABPC4Q13310 644 aaKnown RBP eCLIP3.42□□□□□ -1.86
LRCH3-209ENST00000452660 SQSTM1Q13501 440 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 UBE3CQ15386 1083 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 ZBTB41Q5SVQ8 909 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 EFCAB12Q6NXP0 572 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 FBXO42Q6P3S6 717 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 FRMD7Q6ZUT3 714 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 SLC41A1Q8IVJ1 513 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 MSL3Q8N5Y2 521 aaKnown RBP3.42□□□□□ -1.86
LRCH3-209ENST00000452660 CPEB3Q8NE35 698 aaKnown RBP3.42□□□□□ -1.86
LRCH3-209ENST00000452660 OR10H5Q8NGA6 315 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 OR14C36Q8NHC7 312 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 SNX33Q8WV41 574 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 ANKS1AQ92625 1134 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 CAVIN3Q969G5 261 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF496Q96IT1 587 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-209ENST00000452660 CDC5LQ99459 802 aaKnown RBP3.42□□□□□ -1.86
LRCH3-209ENST00000452660 PRDM13Q9H4Q3 707 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 TMEM74BQ9NUR3 256 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 KCNG1Q9UIX4 513 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 MSRAQ9UJ68 235 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 CDK11AQ9UQ88 783 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-209ENST00000452660 FPGT-TNNI3KV9GXZ4 949 aa3.42□□□□□ -1.86
LRCH3-209ENST00000452660 LEFTY2O00292 366 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 TGM5O43548 720 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 PHF2O75151 1096 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 NDUFA10O95299 355 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 CFIP05156 583 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 CLEC2LP0C7M8 214 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF37AP17032 561 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-209ENST00000452660 MPLP40238 635 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 FLT3LGP49771 235 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 KPNA1P52294 538 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-209ENST00000452660 RNASE9P60153 205 aaKnown RBP3.41□□□□□ -1.86
LRCH3-209ENST00000452660 TCEA2Q15560 299 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 FAM102AQ5T9C2 384 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-209ENST00000452660 AGAP9Q5VTM2 703 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 HDGFL2Q7Z4V5 671 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-209ENST00000452660 SYT12Q8IV01 421 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 AHI1Q8N157 1196 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 PPM1KQ8N3J5 372 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 ADAM2Q99965 735 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 ANKFY1Q9P2R3 1169 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 PRSS50Q9UI38 385 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
LRCH3-209ENST00000452660 PRSS38A1L453 326 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 FOSP01100 380 aaPredicted RBP3.4□□□□□ -1.87
LRCH3-209ENST00000452660 ITGB6P18564 788 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 CXCR5P32302 372 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 LSSP48449 732 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 MANFP55145 182 aaKnown RBP3.4□□□□□ -1.87
LRCH3-209ENST00000452660 MGAT5Q09328 741 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 TERF2Q15554 542 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 PDCD4Q53EL6 469 aaKnown RBP3.4□□□□□ -1.87
LRCH3-209ENST00000452660 FAM47AQ5JRC9 791 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 METRNLQ641Q3 311 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 MICALCLQ6ZW33 695 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 RHOT2Q8IXI1 618 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 CMTR2Q8IYT2 770 aaKnown RBP3.4□□□□□ -1.87
LRCH3-209ENST00000452660 FAM43AQ8N2R8 423 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 BOLLQ8N9W6 283 aaKnown RBP3.4□□□□□ -1.87
LRCH3-209ENST00000452660 SMC1BQ8NDV3 1235 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 TFAP2CQ92754 450 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 MRFAP1L1Q96HT8 127 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 BOD1Q96IK1 185 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 SPON1Q9HCB6 807 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 USP18Q9UMW8 372 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 ATP11BQ9Y2G3 1177 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 SPATA31A6Q5VVP1 1343 aa3.4□□□□□ -1.87
LRCH3-209ENST00000452660 ITGA10O75578 1167 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 CDKL5O76039 1030 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 SPDEFO95238 335 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 FDXRP22570 491 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 ZNF169Q14929 603 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-209ENST00000452660 SPDYE7PQ495Y7 208 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 LYSMD2Q8IV50 215 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 ZNF480Q8WV37 535 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 CHTF18Q8WVB6 975 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 LRFN3Q9BTN0 628 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 DUSP26Q9BV47 211 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 MTFR1LQ9H019 292 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 KMT5AQ9NQR1 393 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 SEMA4GQ9NTN9 838 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 GPRC5DQ9NZD1 345 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 H2AFY2Q9P0M6 372 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-209ENST00000452660 POGKQ9P215 609 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 EVLQ9UI08 416 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms