RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 HOXA11P31270 313 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-216ENST00000449971 PRPHP41219 470 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 IL17AQ16552 155 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 KRT79Q5XKE5 535 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 IGSF22Q8N9C0 903 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 PGBD4Q96DM1 585 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 GBP3Q9H0R5 595 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
FAM3A-216ENST00000449971 PCDHB2Q9Y5E7 798 aa19.41■□□□□ 0.7
FAM3A-216ENST00000449971 GVINP1Q7Z2Y8 2422 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 LRRIQ4A6NIV6 560 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 PP2D1A8MPX8 630 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 ZNF623O75123 536 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 SSBP05455 408 aaKnown RBP eCLIP19.4■□□□□ 0.7
FAM3A-216ENST00000449971 CYP11B2P19099 503 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 ANGPT1Q15389 498 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 GLB1LQ6UWU2 654 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 ERMP1Q7Z2K6 904 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 IFNLR1Q8IU57 520 aaPredicted RBP19.4■□□□□ 0.7
FAM3A-216ENST00000449971 SIX5Q8N196 739 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 ACSF2Q96CM8 615 aaPredicted RBP19.4■□□□□ 0.7
FAM3A-216ENST00000449971 MRPL9Q9BYD2 267 aaKnown RBP19.4■□□□□ 0.7
FAM3A-216ENST00000449971 ZBP1Q9H171 429 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 BHMT2Q9H2M3 363 aa19.4■□□□□ 0.7
FAM3A-216ENST00000449971 MEIS3P2A8K0S8 358 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 TSPAN1O60635 241 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 RFX1P22670 979 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 CDC25AP30304 524 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 AXLP30530 894 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 ATP2C1P98194 919 aaPredicted RBP19.39■□□□□ 0.69
FAM3A-216ENST00000449971 RNASELQ05823 741 aaKnown RBP19.39■□□□□ 0.69
FAM3A-216ENST00000449971 MBTD1Q05BQ5 628 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 PCBP1Q15365 356 aaKnown RBP eCLIP19.39■□□□□ 0.69
FAM3A-216ENST00000449971 UBXN11Q5T124 520 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 CCDC149Q6ZUS6 474 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 CPB2Q96IY4 423 aa19.39■□□□□ 0.69
FAM3A-216ENST00000449971 VPS37CA5D8V6 355 aaPredicted RBP19.38■□□□□ 0.69
FAM3A-216ENST00000449971 MYBP10242 640 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 PDCP20941 246 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 EP300Q09472 2414 aaPredicted RBP19.38■□□□□ 0.69
FAM3A-216ENST00000449971 ZRSR1Q15695 479 aaKnown RBP19.38■□□□□ 0.69
FAM3A-216ENST00000449971 NOMO2Q5JPE7 1267 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 NOTUMQ6P988 496 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 MRPL10Q7Z7H8 261 aaKnown RBP19.38■□□□□ 0.69
FAM3A-216ENST00000449971 BCL7CQ8WUZ0 217 aaPredicted RBP19.38■□□□□ 0.69
FAM3A-216ENST00000449971 NFKBIZQ9BYH8 718 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 POLD4Q9HCU8 107 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 DNM3Q9UQ16 869 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 USTQ9Y2C2 406 aa19.38■□□□□ 0.69
FAM3A-216ENST00000449971 DMXL1Q9Y485 3027 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 VWA3AA6NCI4 1184 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 E9PMD0 336 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 OFD1O75665 1012 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 CTSAP10619 480 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 NPR3P17342 541 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 AOC1P19801 751 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 TDGQ13569 410 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 OTOP3Q7RTS5 596 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 ZBTB8OSQ8IWT0 167 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 CCDC105Q8IYK2 499 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 DTWD2Q8NBA8 298 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 SLC22A17Q8WUG5 538 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
FAM3A-216ENST00000449971 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
FAM3A-216ENST00000449971 B4GALT5O43286 388 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 NARSO43776 548 aaKnown RBP19.36■□□□□ 0.69
FAM3A-216ENST00000449971 CFHP08603 1231 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 ITGA4P13612 1032 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 ARF4P18085 180 aaPredicted RBP19.36■□□□□ 0.69
FAM3A-216ENST00000449971 KLRC2P26717 231 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 AMHR2Q16671 573 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 AGMOQ6ZNB7 445 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 BRAPQ7Z569 592 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 DDX53Q86TM3 631 aaKnown RBP19.36■□□□□ 0.69
FAM3A-216ENST00000449971 CNNM3Q8NE01 707 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 URGCPQ8TCY9 931 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 RIN2Q8WYP3 895 aaPredicted RBP19.36■□□□□ 0.69
FAM3A-216ENST00000449971 RSPH1Q8WYR4 309 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 BSNDQ8WZ55 320 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 CCDC51Q96ER9 411 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 IGSF21Q96ID5 467 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 HINFPQ9BQA5 517 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 MMTAG2Q9BU76 263 aaKnown RBP19.36■□□□□ 0.69
FAM3A-216ENST00000449971 CSRNP2Q9H175 543 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 NRDE2Q9H7Z3 1164 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 SFXN1Q9H9B4 322 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 RSAD1Q9HA92 442 aa19.36■□□□□ 0.69
FAM3A-216ENST00000449971 LIG1P18858 919 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 NCLP19338 710 aaKnown RBP19.35■□□□□ 0.69
FAM3A-216ENST00000449971 ARL6IP4Q66PJ3 421 aaKnown RBP19.35■□□□□ 0.69
FAM3A-216ENST00000449971 GPR149Q86SP6 731 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 SMG8Q8ND04 991 aaKnown RBP19.35■□□□□ 0.69
FAM3A-216ENST00000449971 DEPTORQ8TB45 409 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 IFT74Q96LB3 600 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 PLIN2Q99541 437 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 RTP3Q9BQQ7 232 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 TRIM6Q9C030 488 aaPredicted RBP19.35■□□□□ 0.69
FAM3A-216ENST00000449971 C2orf40Q9H1Z8 148 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 KCNK12Q9HB15 430 aa19.35■□□□□ 0.69
FAM3A-216ENST00000449971 TBC1D13Q9NVG8 400 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms